中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
Insight into the Molecular Evolution of Non-Specific Lipid Transfer Proteins via Comparative Analysis Between Rice and Sorghum

文献类型:期刊论文

作者Wang, Hong Wei1,2,3; Hwang, Sun-Goo4; Karuppanapandian, Thirupathi5; Liu, Aihua2,3; Kim, Wook1; Jang, Cheol Seong4
刊名DNA RESEARCH
出版日期2012-04-01
卷号19期号:2页码:179-194
关键词non-specific lipid transfer protein cutin synthesis concerted evolution gene conversion subfunctionalization
英文摘要

Phylogenetic analysis was conducted on 9 kDa non-specific lipid transfer protein (nsLTP) genes from nine plant species. Each of the five classified types in angiosperms exhibited eight conserved cysteine patterns. The most abundant nsLTP genes fell into the type I category, which was particularly enriched in a grass-specific lineage of clade I.1. Six pairs of tandem copies of nsLTP genes on the distal region of rice chromosomes 11 and 12 were well-preserved under concerted evolution, which was not observed in sorghum. The transgenic promoter reporter assay revealed that both rice and sorghum nsLTP genes of type I displayed a relatively conserved expression feature in the epidermis of growing tissue, supporting its functional roles in cutin synthesis or defence against phytopathogens. For type I, the frequent expression in the stigma and seed are indicative of functional involvement in pistil pollen interactions and seed development. By way of contrast, several type V genes were observed, mainly in the vascular bundle of the rosette as well as the young shoots, which might be related with vascular tissue differentiation or defence signalling. Compared with sorghum, the highly redundant tissue-specific expression pattern among members of rice nsLTP genes in clade I.1 suggests that concerted evolution via gene conversion favours the preservation of crucial expression motifs via the homogenization of proximal promoter sequences under high selection constraints. However, extensive regulatory subfunctionalization might also have occurred under relative low selection constraints, resulting in functional divergence at the expression level.

WOS标题词Science & Technology ; Life Sciences & Biomedicine
类目[WOS]Genetics & Heredity
研究领域[WOS]Genetics & Heredity
关键词[WOS]TISSUE-SPECIFIC EXPRESSION ; WHEAT NSLTP GENES ; PROMOTER ANALYSIS ; DUPLICATE GENES ; ARABIDOPSIS ; FAMILY ; IDENTIFICATION ; DIVERSIFICATION ; DIVERGENCE ; MECHANISMS
收录类别SCI
语种英语
WOS记录号WOS:000303290100007
源URL[http://ir.qibebt.ac.cn/handle/337004/6347]  
专题青岛生物能源与过程研究所_生物传感技术团队
作者单位1.Korea Univ, Div Biotechnol, Coll Life Sci & Biotechnol, Seoul 136713, South Korea
2.Chinese Acad Sci, Qingdao Inst Bioenergy & Bioproc Technol, Lab Biosensing, Qingdao 266101, Peoples R China
3.Chinese Acad Sci, Key Lab Bioenergy, Qingdao 266101, Peoples R China
4.Kangwon Natl Univ, Dept Appl Plant Sci, Plant Genom Lab, Chunchon 200701, Gangwon, South Korea
5.Korea Univ, Inst Life Sci & Nat Resources, Coll Life Sci & Biotechnol, Seoul 136713, South Korea
推荐引用方式
GB/T 7714
Wang, Hong Wei,Hwang, Sun-Goo,Karuppanapandian, Thirupathi,et al. Insight into the Molecular Evolution of Non-Specific Lipid Transfer Proteins via Comparative Analysis Between Rice and Sorghum[J]. DNA RESEARCH,2012,19(2):179-194.
APA Wang, Hong Wei,Hwang, Sun-Goo,Karuppanapandian, Thirupathi,Liu, Aihua,Kim, Wook,&Jang, Cheol Seong.(2012).Insight into the Molecular Evolution of Non-Specific Lipid Transfer Proteins via Comparative Analysis Between Rice and Sorghum.DNA RESEARCH,19(2),179-194.
MLA Wang, Hong Wei,et al."Insight into the Molecular Evolution of Non-Specific Lipid Transfer Proteins via Comparative Analysis Between Rice and Sorghum".DNA RESEARCH 19.2(2012):179-194.

入库方式: OAI收割

来源:青岛生物能源与过程研究所

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