Complete mitochondrial genome of the brown alga Colpomenia peregrina (Scytosiphonaceae, Phaeophyceae): genome characterization and comparative analyses
文献类型：期刊论文
| 作者 | Liu, Feng; Pang, Shaojun; Li, Jing ; Li, Xia
|
| 刊名 | MITOCHONDRIAL DNA
 |
| 出版日期 | 2016 |
| 卷号 | 27期号:3页码:1601-1603 |
| 关键词 | Brown alga Colpomenia peregrina mitochondrial genome Phaeophyceae Scytosiphonaceae |
| 英文摘要 | Colpomenia peregrina Sauvageau has a biphasic, heteromorphic life history alternated with saccate gametophytes and crustose sporophytes. The circular C. peregrina mitogenome is 36,025 bp in length and encodes 66 genes, including 3 ribosomal RNA genes (rRNA), 25 transfer RNA genes (tRNA), 35 protein-coding genes, and 3 open reading frames (ORFs). It is the shortest and most compact of the sequenced Ectocarpales mitogenomes to date. The overall A + T content in C. peregrina mitogenome is 68.01%, higher than that of other reported Ectocarpales species (62.01-66.49%). The total intergenic spacers are 1499 bp, constituting 4.16% of the whole genome. Genome organization of C. peregrina is essentially identical to that of known Ectocarpales species, except for Pylaiella littoralis. Phylogenetic analyses based on 35 protein-coding genes show that Scytosiphon lomentaria and Petalonia fascia firstly cluster together, and then group with C. peregrina forming the Scytosiphon-Petalonia-Colpomenia subclade with high support values, indicating their close evolutionary relationships. |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000377538000014 |
| 版本 | 出版稿 |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/130980]  |
| 专题 | 海洋研究所_实验海洋生物学重点实验室 |
| 作者单位 | Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, 7 Nanhai Rd, Qingdao 266071, Peoples R China |
| 推荐引用方式 GB/T 7714 | Liu, Feng,Pang, Shaojun,Li, Jing,et al. Complete mitochondrial genome of the brown alga Colpomenia peregrina (Scytosiphonaceae, Phaeophyceae): genome characterization and comparative analyses[J]. MITOCHONDRIAL DNA,2016,27(3):1601-1603. |
| APA | Liu, Feng,Pang, Shaojun,Li, Jing,&Li, Xia.(2016).Complete mitochondrial genome of the brown alga Colpomenia peregrina (Scytosiphonaceae, Phaeophyceae): genome characterization and comparative analyses.MITOCHONDRIAL DNA,27(3),1601-1603. |
| MLA | Liu, Feng,et al."Complete mitochondrial genome of the brown alga Colpomenia peregrina (Scytosiphonaceae, Phaeophyceae): genome characterization and comparative analyses".MITOCHONDRIAL DNA 27.3(2016):1601-1603. |
入库方式： OAI收割
来源：海洋研究所
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