Saccharina genomes provide novel insight into kelp biology
文献类型：期刊论文
| 作者 | Ye, Naihao1; Zhang, Xiaowen1; Miao, Miao2,3; Fan, Xiao1; Zheng, Yi2,3; Xu, Dong1; Wang, Jinfeng2; Zhou, Lin2,3; Wang, Dongsheng1; Gao, Yuan2,3 |
| 刊名 | NATURE COMMUNICATIONS
 |
| 出版日期 | 2015-04-01 |
| 卷号 | 6 |
| 英文摘要 | Seaweeds are essential for marine ecosystems and have immense economic value. Here we present a comprehensive analysis of the draft genome of Saccharina japonica, one of the most economically important seaweeds. The 537-Mb assembled genomic sequence covered 98.5% of the estimated genome, and 18,733 protein-coding genes are predicted and annotated. Gene families related to cell wall synthesis, halogen concentration, development and defence systems were expanded. Functional diversification of the mannuronan C-5-epimerase and haloperoxidase gene families provides insight into the evolutionary adaptation of polysaccharide biosynthesis and iodine antioxidation. Additional sequencing of seven cultivars and nine wild individuals reveal that the genetic diversity within wild populations is greater than among cultivars. All of the cultivars are descendants of a wild Saccharina japonica accession showing limited admixture with Saccharina longissima. This study represents an important advance toward improving yields and economic traits in Saccharina and provides an invaluable resource for plant genome studies. |
| WOS标题词 | Science & Technology |
| 类目[WOS] | Multidisciplinary Sciences |
| 研究领域[WOS] | Science & Technology - Other Topics |
| 关键词[WOS] | ALGA ECTOCARPUS-SILICULOSUS ; DE-NOVO IDENTIFICATION ; LAMINARIA-DIGITATA ; BROWN-ALGAE ; RNA-SEQ ; PHYLOGENETIC ANALYSES ; MANNITOL METABOLISM ; MAXIMUM-LIKELIHOOD ; DEFENSE RESPONSES ; GENE PREDICTION |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000353705100004 |
| 源URL | [http://124.16.173.210/handle/834782/1460]  |
| 专题 | 天津工业生物技术研究所_工业生物系统工程实验室 陈树林_期刊论文 |
| 作者单位 | 1.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Peoples R China 2.Chinese Acad Sci, Beijing Inst Life Sci, Computat Genom Lab, Beijing 100101, Peoples R China 3.Univ Chinese Acad Sci, Coll Life Sci, Beijing 100049, Peoples R China 4.Chinese Acad Sci, Tianjin Inst Ind Biotechnol, Tianjin Key Lab Ind Biosyst & Bioproc Engn, Tianjin 300308, Peoples R China 5.Shandong Univ Technol, Sch Life Sci, Zibo 255049, Peoples R China 6.Fudan Univ, Sch Life Sci, Inst Plant Biol, State Key Lab Genet Engn, Shanghai 200433, Peoples R China 7.Fudan Univ, Sch Life Sci, Inst Plant Biol, Collaborat Innovat Ctr Genet & Dev, Shanghai 200433, Peoples R China |
| 推荐引用方式 GB/T 7714 | Ye, Naihao,Zhang, Xiaowen,Miao, Miao,et al. Saccharina genomes provide novel insight into kelp biology[J]. NATURE COMMUNICATIONS,2015,6. |
| APA | Ye, Naihao.,Zhang, Xiaowen.,Miao, Miao.,Fan, Xiao.,Zheng, Yi.,...&Zhao, Fangqing.(2015).Saccharina genomes provide novel insight into kelp biology.NATURE COMMUNICATIONS,6. |
| MLA | Ye, Naihao,et al."Saccharina genomes provide novel insight into kelp biology".NATURE COMMUNICATIONS 6(2015). |
入库方式： OAI收割
来源：天津工业生物技术研究所
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