The complete mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) and the analyses of phylogenetic relationships within the Syngnathidae species
文献类型：期刊论文
| 作者 | Zhang, Huixian1; Zhang, Yanhong1; Qin, Geng1; Lin, Qiang1 |
| 刊名 | MARINE GENOMICS
 |
| 出版日期 | 2015 |
| 卷号 | 19页码:59-64 |
| 关键词 | Colythoichthys flavofasciatus Syngnathidae Mitogenome Phylogenetic analysis |
| 通讯作者 | linqiangzsu@163.com |
| 英文摘要 | This study determined the mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) (Gasterosteiformes: Syngnathidae). The mitogenome was a circular molecule consisting of 16,961 nucleotides, including 13 protein-coding genes, 22 tRNA genes, two rRNA genes and a control region. The nucleotide composition of the genome was biased toward A + T content at 59.3%. All tRNA genes had typical cloverleaf secondary structure except for tRNA(Ser (AGY)), in which the dihydrouridine arm was missing. The C. flavofasciatus control region of 1130 bp contained several features common to other teleost, including conserved sequence blocks. We also performed comparative analysis of the network pipefish mitogenome to the available mitogenome sequences of other Syngnathidae species, and phylogenetic relationship of the Syngnathidae species was constructed based on the data sets including all the concatenated nucleotide sequences of the mitogenomes except the third codon positions. Partitioned Bayesian inference and maximum likelihood analyses showed that all seahorse species formed a monophyletic group of Hippocampus with 100% PPs and BPs, but the pipefish species did not form a monophyletic group. Colythoichthysflavofasciatus was placed as a sister relationship to the Hippocampus clade by strong node-supporting values. The availability of mitogenome of the network pipefish will shed light on the molecular systematics, biogeography and genetic differentiation in this species. (C) 2014 Elsevier B.V. All rights reserved. |
| 学科主题 | Genetics & Heredity; Marine & Freshwater Biology |
| 原文出处 | 1874-7787 |
| 源URL | [http://ir.scsio.ac.cn/handle/344004/14866]  |
| 专题 | 南海海洋研究所_中科院海洋生物资源可持续利用重点实验室 |
| 作者单位 | 1.[Zhang, Huixian 2.Zhang, Yanhong 3.Qin, Geng 4.Lin, Qiang] Chinese Acad Sci, South China Sea Inst Oceanol, Key Lab Trop Marine Bioresources & Ecol, Guangzhou 510275, Guangdong, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhang, Huixian,Zhang, Yanhong,Qin, Geng,et al. The complete mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) and the analyses of phylogenetic relationships within the Syngnathidae species[J]. MARINE GENOMICS,2015,19:59-64. |
| APA | Zhang, Huixian,Zhang, Yanhong,Qin, Geng,&Lin, Qiang.(2015).The complete mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) and the analyses of phylogenetic relationships within the Syngnathidae species.MARINE GENOMICS,19,59-64. |
| MLA | Zhang, Huixian,et al."The complete mitochondrial genome sequence of the network pipefish (Corythoichthys flavofasciatus) and the analyses of phylogenetic relationships within the Syngnathidae species".MARINE GENOMICS 19(2015):59-64. |
入库方式： OAI收割
来源：南海海洋研究所
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