DomeTree: a Canonical Toolkit for Mitochondrial DNA Analyses in Domesticated Animals
文献类型：期刊论文
| 作者 | Peng MS1,2; Fan L3; Shi NN1,2; Ning T4; Yao YG1,5; Murphy RW1,6; Wang WZ[*]1,2; Zhang YP[*]1,2,4 |
| 刊名 | MOLECULAR ECOLOGY RESOURCES
 |
| 出版日期 | 2015 |
| 卷号 | 15期号:5页码:1238-1242 |
| 关键词 | domestic animal haplogroup tree mtDNA phylogeny software |
| 通讯作者 | wangwz@mail.kiz.ac.cn ; zhangyp@mail.kiz.ac.cn |
| 合作状况 | 其它 |
| 英文摘要 | Mitochondrial DNA (mtDNA) is widely used in various genetic studies of domesticated animals. Many applications require comprehensive knowledge about the phylogeny of mtDNA variants. Herein, we provide the most up-to-date mtDNA phylogeny (i.e. haplogroup tree or matrilineal genealogy) and a standardized hierarchical haplogroup nomenclature system for domesticated cattle, dogs, goats, horses, pigs, sheep, yaks and chickens. These high-resolution mtDNA haplogroup trees based on 1240 complete or near-complete mtDNA genome sequences are available in open resource DomeTree (). In addition, we offer the software MitoToolPy () to facilitate the mtDNA data analyses. We will continuously and regularly update DomeTree and MitoToolPy. |
| 收录类别 | SCI |
| 资助信息 | This work was supported by the 973 program (2013CB835200 and 2013CB835204). M-S.P. thanks the support from the Youth Innovation Promotion Association, Chinese Academy of Sci- ences. R.W.M. thanks the support from the Visiting Professor- ship for Senior International Scientists from the Chinese Academy of Sciences. |
| 语种 | 英语 |
| 源URL | [http://159.226.149.26:8080/handle/152453/9338]  |
| 专题 | 昆明动物研究所_分子进化基因组学 昆明动物研究所_动物模型与人类重大疾病机理重点实验室 昆明动物研究所_遗传资源与进化国家重点实验室 昆明动物研究所_重大疾病机理的遗传学 昆明动物研究所_生命条形码中心 |
| 作者单位 | 1.State Key Laboratory of Genetic Resources and Evolution, Yunnan Laboratory of Molecular Biology of Domestic Animals, and Germplasm Bank of Wild Species, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China, †Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming, Yunnan 650204, China 2.Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming, Yunnan 650204, China 3.School of Life Sciences, The Chinese University of Hong Kong, Shatin, Hong Kong SAR 999077, China 4.Laboratory for Conservation and Utilization of Bio-Resources & Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan 650091, China 5.Key Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences & Yunnan Province, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China 6.Centre for Biodiversity and Conservation Biology, Royal Ontario Museum, Toronto, Ontario, M5S 2C6, Canada |
| 推荐引用方式 GB/T 7714 | Peng MS,Fan L,Shi NN,et al. DomeTree: a Canonical Toolkit for Mitochondrial DNA Analyses in Domesticated Animals[J]. MOLECULAR ECOLOGY RESOURCES,2015,15(5):1238-1242. |
| APA | Peng MS.,Fan L.,Shi NN.,Ning T.,Yao YG.,...&Zhang YP[*].(2015).DomeTree: a Canonical Toolkit for Mitochondrial DNA Analyses in Domesticated Animals.MOLECULAR ECOLOGY RESOURCES,15(5),1238-1242. |
| MLA | Peng MS,et al."DomeTree: a Canonical Toolkit for Mitochondrial DNA Analyses in Domesticated Animals".MOLECULAR ECOLOGY RESOURCES 15.5(2015):1238-1242. |
入库方式： OAI收割
来源：昆明动物研究所
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