On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes
文献类型：期刊论文
| 作者 | Yu L[*]1; Peng D1; Lee H3; Lee M3; Ryder OA4; Zhang YP[*]1,2; Liu J1; Luan PT1; Liang L2 |
| 刊名 | BMC EVOLUTIONARY BIOLOGY
 |
| 出版日期 | 2011 |
| 卷号 | 11期号:X页码:e92 |
| 通讯作者 | yuli1220@yahoo.com.cn ; zhangyp@mail.kiz.ac.cn |
| 合作状况 | 其它 |
| 英文摘要 | Background: Mustelidae, as the largest and most-diverse family of order Carnivora, comparises eight subfamilies. Phylogenetic relationships among these Mustelidae subfamilies remain argumentative subjects in recent years. One speciation even. Prior investigation has been concentrated on the applicaiton of different mitochodrial (mt) sequence and nuclear protein-coding data, herein we employ 17 nuclear non-coding (> 15 kb), in conjunction with mt complete genome data (> 16 kb), to clarify these enigmatic problems. Results: The combined nuclear intron and mt genome analyses both robustly support that Taxidiinae diverged first, followed by Meliane. Lutrinae and Mustelinae are grouped together in all analyses with strong supports. The position of Helictidinae. however, is enigmatic because the mt genome analysis places it to the clade uniting Lutrinae and Mustelinae. whereas the nuclear intron analysis favores a novel view supporting a closer relationship of Helictidinae to Mustelinae. This finding emphasizes a need to add more data and include more taxa to resolve this problem. In addition. the molecular dating provides into the time scale of origin and diversification of the Mustelidae subfamilies. Finally, the phylogenetic performances and limits of nuclear introns and mt genes are discussed in the context of Mustelidae phylogeny. Conclusion: Our study not only brings new perspectives on the perviously obscured phylogenetic relationships among Mustelidae subfamilies, but also provides another example demonstrating the effectiveness of nuclear non-coding loci for reconstructing evolutionary histories in a group that has undergone rapid bursts of speciation. |
| 收录类别 | SCI |
| 资助信息 | This work was supported by grants from the State Key Basic Research and Development Plan (2007CB411600), and National Natural Science Foundation of China (30600067, U083660). |
| 语种 | 英语 |
| 源URL | [http://159.226.149.26:8080/handle/152453/10432]  |
| 专题 | 昆明动物研究所_分子进化基因组学 昆明动物研究所_遗传资源与进化国家重点实验室 |
| 作者单位 | 1.Laboratory for Conservation and Utilization of Bio-resource & Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, PR, China 2.State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Kunming 650223, China. 3.Conservation Genome Resource Bank for Korean Wildlife, Research Institute for Veterinary Science and Coll. of Vet. Med., Seoul National Univ., Seoul 151-742, South Korea. 4.San Diego Zoo’s Institute for Conservation Research, Escondido, CA 92027-7000, USA |
| 推荐引用方式 GB/T 7714 | Yu L[*],Peng D,Lee H,et al. On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes[J]. BMC EVOLUTIONARY BIOLOGY,2011,11(X):e92. |
| APA | Yu L[*].,Peng D.,Lee H.,Lee M.,Ryder OA.,...&Liang L.(2011).On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes.BMC EVOLUTIONARY BIOLOGY,11(X),e92. |
| MLA | Yu L[*],et al."On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes".BMC EVOLUTIONARY BIOLOGY 11.X(2011):e92. |
入库方式： OAI收割
来源：昆明动物研究所
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