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Identification of protein superfamily from structure-based sequence motif

文献类型：期刊论文

作者Huang JF[*]; Liu CQ
刊名CHINESE SCIENCE BULLETIN
出版日期2002
卷号47期号:16页码:1377-1381
关键词protein tyrosine phosphatases sequence motif sequence identification of superfamily hypothetical proteins molecular evolution
ISSN号1001-6538
通讯作者jfhuang@pulic.km.yn.cn
合作状况其它
英文摘要The structure-based sequence motif of the distant proteins in evolution, protein tyrosine phosphatases (PTP) I and II superfamilies, as an example, has been defined by the structural comparison, structure-based sequence alignment and analyses on substitution patterns of residues in common sequence conserved regions. And the phosphatases I and II can be correctly identified together by the structure-based PTP sequence motif from SWISS-PROT and TrEBML databases. The results show that the correct rates of identification are over 98%. This is the first time to identify PTP I and II together by this motif.
收录类别SCI
资助信息This work was supported by the National Natural Science Foundation of China (Grant Nos. 30170507 and 30024004) and the Natural Science Foundation of Yunnan Province (Grant Nos. 98C007R and 1999C0084M).
原文出处2002471377.pdf
语种英语
公开日期2010-08-24
源URL[http://159.226.149.42:8088/handle/152453/4893]  
专题昆明动物研究所_结构生物信息学
昆明动物研究所_细胞与分子进化重点实验室
作者单位Key Laboratory of Cellular and Molecular Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China
推荐引用方式
GB/T 7714		 Huang JF[*],Liu CQ. Identification of protein superfamily from structure-based sequence motif[J]. CHINESE SCIENCE BULLETIN,2002,47(16):1377-1381.
APA Huang JF[*],&Liu CQ.(2002).Identification of protein superfamily from structure-based sequence motif.CHINESE SCIENCE BULLETIN,47(16),1377-1381.
MLA Huang JF[*],et al."Identification of protein superfamily from structure-based sequence motif".CHINESE SCIENCE BULLETIN 47.16(2002):1377-1381.

入库方式： OAI收割

来源：昆明动物研究所

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