Multilocus approaches reveal underestimated species diversity and inter-specific gene flow in pikas (Ochotona) from southwestern China
文献类型：期刊论文
| 作者 | Koju NP1,2,3; He K[*]1,4,7; Zhang B1,2; Wan T1; Chen SD6; Jiang XL[*]1; Chalise MK3; Ray C5; Chen ZZ1,2 |
| 刊名 | Molecular Phylogenetics and Evolution
 |
| 出版日期 | 2016 |
| 卷号 | 107期号:X页码:239–245 |
| 关键词 | Cryptic species Mitochondrial introgression Multilocus species delimitation Ochotona |
| 通讯作者 | hekai@mail.kiz.ac.cn ; jiangxl@mail.kiz.ac.cn |
| 合作状况 | 其它 |
| 英文摘要 | The phylogeny of living pikas (Ochotonidae, Ochotona) remains obscure, and pika species diversity in southwestern China has never been well explored. In this study, 96 tissue samples from 11 valid species in three classified subgenera (Pika, Ochotona and Conothoa) from 23 locations were characterized using multilocus sequences of 7031bp. Two mitochondrial (CYT B and COI) and five nuclear gene segments (RAG1, RAG2, TTN, OXAIL and IL1RAPL1) were sequenced. We analysed evolutionary histories using maximum likelihood (RAxML) and Bayesian analyses (BEAST), and we also used molecular species delimitation analyses (BPP) to explore species diversity. Our study supported O. syrinx (O. huangensis) as a distinct clade from all named subgenera. Relationships among subgenera were not fully resolved, which may be due to a rapid diversification in the middle Miocene (∼13.90Ma). Conflicting gene trees implied mitochondrial introgression from O. cansus to O. curzoniae. We uncovered three cryptic species from Shaanxi, Sichuan and Yunnan with strong support, suggesting an underestimation of species diversity in the "sky-island" mountains of southwest China. |
| 收录类别 | SCI |
| 资助信息 | This research is supported by the Chinese Academy of Science-Third World Academy of Science President’s fellowship programme and the Key Research Program of the Chi- nese Academy of Sciences, Grant NO. KJZD-EW-L07. |
| 语种 | 英语 |
| 源URL | [http://159.226.149.26:8080/handle/152453/10670]  |
| 专题 | 昆明动物研究所_兽类生态与进化 昆明动物研究所_遗传资源与进化国家重点实验室 |
| 作者单位 | 1.State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China 2.Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming 650223, China 3.Central Department of Zoology, Tribhuvan University, Kathmandu, Nepal 4.Smithsonian Institution, National Museum of Natural History, Washington, DC 20004, USA 5.Department of Ecology and Evolutionary Biology and Institute of Arctic and Alpine Research, University of Colorado-Boulder, 450 UCB, Boulder, CO 80309-0450, USA 6.College of Life Sciences, Sichuan Normal University, Chengdu 610066, China 7.The Kyoto University Museum, Kyoto University, Kyoto 606-8501, Japan |
| 推荐引用方式 GB/T 7714 | Koju NP,He K[*],Zhang B,et al. Multilocus approaches reveal underestimated species diversity and inter-specific gene flow in pikas (Ochotona) from southwestern China[J]. Molecular Phylogenetics and Evolution,2016,107(X):239–245. |
| APA | Koju NP.,He K[*].,Zhang B.,Wan T.,Chen SD.,...&Chen ZZ.(2016).Multilocus approaches reveal underestimated species diversity and inter-specific gene flow in pikas (Ochotona) from southwestern China.Molecular Phylogenetics and Evolution,107(X),239–245. |
| MLA | Koju NP,et al."Multilocus approaches reveal underestimated species diversity and inter-specific gene flow in pikas (Ochotona) from southwestern China".Molecular Phylogenetics and Evolution 107.X(2016):239–245. |
入库方式： OAI收割
来源：昆明动物研究所
浏览0
下载0
收藏0
其他版本
除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。