Functional Genome Mining for Metabolites Encoded by Large Gene Clusters through Heterologous Expression of a Whole-Genome Bacterial Artificial Chromosome Library in Streptomyces spp.
文献类型：期刊论文
| 作者 | Xu, Min1; Wang, Yemin1; Zhao, Zhilong2; Gao, Guixi1; Huang, Sheng-Xiong3 ; Kang, Qianjin1; He, Xinyi1; Lin, Shuangjun1; Pang, Xiuhua2; Deng, Zixin1
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| 刊名 | APPLIED AND ENVIRONMENTAL MICROBIOLOGY
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| 出版日期 | 2016-10-01 |
| 卷号 | 82期号:19页码:5795-5805 |
| 英文摘要 | Genome sequencing projects in the last decade revealed numerous cryptic biosynthetic pathways for unknown secondary metabolites in microbes, revitalizing drug discovery from microbial metabolites by approaches called genome mining. In this work, we developed a heterologous expression and functional screening approach for genome mining from genomic bacterial artificial chromosome (BAC) libraries in Streptomyces spp. We demonstrate mining from a strain of Streptomyces rochei, which is known to produce streptothricins and borrelidin, by expressing its BAC library in the surrogate host Streptomyces lividans SBT5, and screening for antimicrobial activity. In addition to the successful capture of the streptothricin and borrelidin biosynthetic gene clusters, we discovered two novel linear lipopeptides and their corresponding biosynthetic gene cluster, as well as a novel cryptic gene cluster for an unknown antibiotic from S. rochei. This high-throughput functional genome mining approach can be easily applied to other streptomycetes, and it is very suitable for the large-scale screening of genomic BAC libraries for bioactive natural products and the corresponding biosynthetic pathways. |
| 类目[WOS] | Biotechnology & Applied Microbiology ; Microbiology |
| 研究领域[WOS] | Biotechnology & Applied Microbiology ; Microbiology |
| 关键词[WOS] | ESCHERICHIA-COLI ; NATURAL-PRODUCTS ; COELICOLOR A3(2) ; SECONDARY METABOLISM ; DIRECT CLONING ; BIOSYNTHESIS ; DISCOVERY ; DNA ; POLYKETIDE ; SEQUENCE |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000384048700007 |
| 源URL | [http://ir.kib.ac.cn/handle/151853/33613]  |
| 专题 | 昆明植物研究所_植物化学与西部植物资源持续利用国家重点实验室 |
| 作者单位 | 1.Shanghai Jiao Tong Univ, Sch Life Sci & Biotechnol, State Key Lab Microbial Metab, Shanghai, Peoples R China 2.Shandong Univ, Sch Life Sci, State Key Lab Microbial Technol, Jinan, Peoples R China 3.Chinese Acad Sci, Kunming Inst Bot, Kunming, Peoples R China |
| 推荐引用方式 GB/T 7714 | Xu, Min,Wang, Yemin,Zhao, Zhilong,et al. Functional Genome Mining for Metabolites Encoded by Large Gene Clusters through Heterologous Expression of a Whole-Genome Bacterial Artificial Chromosome Library in Streptomyces spp.[J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY,2016,82(19):5795-5805. |
| APA | Xu, Min.,Wang, Yemin.,Zhao, Zhilong.,Gao, Guixi.,Huang, Sheng-Xiong.,...&Tao, Meifeng.(2016).Functional Genome Mining for Metabolites Encoded by Large Gene Clusters through Heterologous Expression of a Whole-Genome Bacterial Artificial Chromosome Library in Streptomyces spp..APPLIED AND ENVIRONMENTAL MICROBIOLOGY,82(19),5795-5805. |
| MLA | Xu, Min,et al."Functional Genome Mining for Metabolites Encoded by Large Gene Clusters through Heterologous Expression of a Whole-Genome Bacterial Artificial Chromosome Library in Streptomyces spp.".APPLIED AND ENVIRONMENTAL MICROBIOLOGY 82.19(2016):5795-5805. |
入库方式： OAI收割
来源：昆明植物研究所
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