Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants
文献类型：期刊论文
| 作者 | Yang, Guo-Qian1,2 ; Chen, Yun-Mei1,2; Wang, Jin-Peng3; Guo, Cen1,2; Zhao, Lei1,2; Wang, Xiao-Yan1; Guo, Ying1,2; Li, Li3; Li, De-Zhu1; Guo, Zhen-Hua1
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| 刊名 | PLANT METHODS
 |
| 出版日期 | 2016-08-04 |
| 卷号 | 12期号:1页码:39 |
| 关键词 | RAD-seq ddRAD MiddRAD Genotype-by-sequencing Next-generation sequencing |
| 英文摘要 | Background: The double digest restriction-site associated DNA sequencing technology (ddRAD-seq) is a reduced representation sequencing technology by sampling genome-wide enzyme loci developed on the basis of next-generation sequencing. ddRAD-seq has been widely applied to SNP marker development and genotyping on animals, especially on marine animals as the original ddRAD protocol is mainly built and trained based on animal data. However, wide application of ddRAD-seq technology in plant species has not been achieved so far. Here, we aim to develop an optimized ddRAD library preparation protocol be accessible to most angiosperm plant species without much startup pre-experiment and costs. |
| 类目[WOS] | Biochemical Research Methods ; Plant Sciences |
| 研究领域[WOS] | Biochemistry & Molecular Biology ; Plant Sciences |
| 关键词[WOS] | BAMBOOS POACEAE BAMBUSOIDEAE ; DENSITY GENETIC-MAP ; WOODY BAMBOOS ; PHYLOGENETIC ANALYSIS ; GENOME ; IDENTIFICATION ; TEMPERATE ; CONSTRUCTION ; MARKERS ; STACKS |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000382353900001 |
| 源URL | [http://ir.kib.ac.cn/handle/151853/33602]  |
| 专题 | 昆明植物研究所_中国西南野生生物种质资源库 |
| 作者单位 | 1.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Peoples R China 2.Univ Chinese Acad Sci, Kunming Coll Life Sci, Kunming 650201, Peoples R China 3.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China |
| 推荐引用方式 GB/T 7714 | Yang, Guo-Qian,Chen, Yun-Mei,Wang, Jin-Peng,et al. Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants[J]. PLANT METHODS,2016,12(1):39. |
| APA | Yang, Guo-Qian.,Chen, Yun-Mei.,Wang, Jin-Peng.,Guo, Cen.,Zhao, Lei.,...&Guo, Zhen-Hua.(2016).Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants.PLANT METHODS,12(1),39. |
| MLA | Yang, Guo-Qian,et al."Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants".PLANT METHODS 12.1(2016):39. |
入库方式： OAI收割
来源：昆明植物研究所
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