Due to the upcoming demands of next-generation electronic/magnetoelectronic devices with low-energy consumption, emerging correlated materials (such as superconductors, topological insulators and manganites) are one of the highly promising candidates for the applications. For the past decades, manganites have attracted great interest due to the colossal magnetoresistance effect, charge-spin-orbital ordering, and electronic phase separation. However, the incapable of deterministic control of those emerging low-dimensional spin structures at ambient condition restrict their possible applications. Therefore, the understanding and control of the dynamic behaviors of spin order parameters at nanoscale in manganites under external stimuli with low energy consumption, especially at room temperature is highly desired. In this review, we collected recent major progresses of nanoscale control of spin structures in manganites at low dimension, especially focusing on the control of their phase boundaries, domain walls as well as the topological spin structures (e.g., skyrmions). In addition, capacitor-based prototype spintronic devices are proposed by taking advantage of the above control methods in manganites. This capacitor-based structure may provide a new platform for the design of future spintronic devices with low-energy consumption.