FasParser: a package for manipulating sequence data
文献类型：期刊论文
| 作者 | Sun YB[*] |
| 刊名 | Zoological Research
 |
| 出版日期 | 2017 |
| 卷号 | 38期号:2页码:1-11 |
| 关键词 | Batch processing Extraction and filtration FasParser Sequence comparison |
| 通讯作者 | sunyanbo@mail.kiz.ac.cn |
| 英文摘要 | A computer software package called 'FasParser' was developed for manipulating sequence data. It can be used on personal computers to perform series of analyses, including counting and viewing differences between two sequences at both DNA and codon levels, identifying overlapping regions between two alignments, sorting of sequences according to their IDs or lengths, concatenating sequences of multiple loci for a particular set of samples, translating nucleotide sequences to amino acids, and constructing alignments in several different formats, as well as some extracting and filtrating of data for a particular FASTA file. Majority of these functions can be run in a batch mode, which is very useful for analyzing large data sets. This package can be used by a broad audience, and is designed for researchers that do not have programming experience in sequence analyses. The GUI version of FasParser can be downloaded from https://github.com/Sun-Yanbo/FasParser, free of charge. |
| 收录类别 | 其他 |
| 资助信息 | The development of this package was promoted by the data accumulated through the programs of the National Natural Science Foundation of China (31671326, 81602346, and 31401958) |
| 语种 | 英语 |
| 源URL | [http://159.226.149.26:8080/handle/152453/11030]  |
| 专题 | 昆明动物研究所_分子进化基因组学 |
| 作者单位 | Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming 650223, China |
| 推荐引用方式 GB/T 7714 | Sun YB[*]. FasParser: a package for manipulating sequence data[J]. Zoological Research,2017,38(2):1-11. |
| APA | Sun YB[*].(2017).FasParser: a package for manipulating sequence data.Zoological Research,38(2),1-11. |
| MLA | Sun YB[*]."FasParser: a package for manipulating sequence data".Zoological Research 38.2(2017):1-11. |
入库方式： OAI收割
来源：昆明动物研究所
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