Whole genome molecular phylogeny of large dsDNA viruses using composition vector method
文献类型：期刊论文
| 作者 | Gao, Lei; Qi, Ji; Gao, L , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China |
| 刊名 | BMC EVOLUTIONARY BIOLOGY
 |
| 出版日期 | 2007 |
| 卷号 | 7期号:1页码:- |
| ISSN号 | 1471-2148 |
| 关键词 | World Monkey Adenovirus Large Dna Viruses Sequence-analysis Cellular Genes Common Origin Evolution Hosts Herpesvirus Baculovirus Protein |
| 英文摘要 | Background: One important mechanism by which large DNA viruses increase their genome size is the addition of modules acquired from other viruses, host genomes or gene duplications. Phylogenetic analysis of large DNA viruses, especially using methods based on alignment, is often difficult due to the presence of horizontal gene transfer events. The recent composition vector approach, not sensitive to such events, is applied here to reconstruct the phylogeny of 124 large DNA viruses. Results: The results are mostly consistent with the biologist's systematics with only a few outliers and can also provide some information for those unclassified viruses and cladistic relationships of several families. Conclusion: With composition vector approach we obtained the phylogenetic tree of large DNA viruses, which not only give results comparable to biologist's systematics but also provide a new way for recovering the phylogeny of viruses. |
| 学科主题 | Physics |
| URL标识 | 查看原文 |
| WOS记录号 | WOS:000245463500001 |
| 公开日期 | 2012-08-02 |
| 源URL | [http://ir.itp.ac.cn/handle/311006/5773]  |
| 专题 | 理论物理研究所_理论物理所1978-2010年知识产出 |
| 通讯作者 | Gao, L , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China |
| 推荐引用方式 GB/T 7714 | Gao, Lei,Qi, Ji,Gao, L , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China. Whole genome molecular phylogeny of large dsDNA viruses using composition vector method[J]. BMC EVOLUTIONARY BIOLOGY,2007,7(1):-. |
| APA | Gao, Lei,Qi, Ji,&Gao, L , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China.(2007).Whole genome molecular phylogeny of large dsDNA viruses using composition vector method.BMC EVOLUTIONARY BIOLOGY,7(1),-. |
| MLA | Gao, Lei,et al."Whole genome molecular phylogeny of large dsDNA viruses using composition vector method".BMC EVOLUTIONARY BIOLOGY 7.1(2007):-. |
入库方式： OAI收割
来源：理论物理研究所
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