Long-range correlations of RNA polymerase II promoter sequences across organisms
文献类型：期刊论文
| 作者 | Katsaloulis, P; Theoharis, T; Zheng, WM ; Hao, BL; Bountis, A; Almirantis, Y; Provata, A; Provata, A , Natl Ctr Sci Res Demokritos, Inst Chem Phys, GR-15310 Athens, Greece
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| 刊名 | PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS
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| 出版日期 | 2006 |
| 卷号 | 366期号:1页码:308-322 |
| 关键词 | Noncoding Dna-sequences Nucleotide-sequences Evolution Genomes |
| ISSN号 | 0378-4371 |
| 英文摘要 | The statistical properties of the size distribution of DNA segments separating identical oligonucleotides are studied. For representative eukaryotes (Homo sapiens, Mus musculus, Saccharomyces cereviciae, Oryza sativa, Arabidopsis thaliana) we have demonstrated the existence of long-range correlations for the distances separating oligonucleotides of sizes 4, 5 and 6, which carry a promoter signature. This observation is independent of the consensus sequence used by the organism, as in the case of O. sativa (which mainly uses the CG promoter box) and A. thaliana (which mainly uses the TATA promoter box). If we use two parameters to characterise the size distribution separating oligonucleotides, we observe that oligonucleotides containing promoter signatures cluster together, away from the others. (c) 2005 Elsevier B.V. All rights reserved. |
| 学科主题 | Physics |
| URL标识 | 查看原文 |
| WOS记录号 | WOS:000237955400026 |
| 公开日期 | 2012-08-02 |
| 源URL | [http://ir.itp.ac.cn/handle/311006/5958]  |
| 专题 | 理论物理研究所_理论物理所1978-2010年知识产出 |
| 通讯作者 | Provata, A , Natl Ctr Sci Res Demokritos, Inst Chem Phys, GR-15310 Athens, Greece |
| 推荐引用方式 GB/T 7714 | Katsaloulis, P,Theoharis, T,Zheng, WM,et al. Long-range correlations of RNA polymerase II promoter sequences across organisms[J]. PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS,2006,366(1):308-322. |
| APA | Katsaloulis, P.,Theoharis, T.,Zheng, WM.,Hao, BL.,Bountis, A.,...&Provata, A , Natl Ctr Sci Res Demokritos, Inst Chem Phys, GR-15310 Athens, Greece.(2006).Long-range correlations of RNA polymerase II promoter sequences across organisms.PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS,366(1),308-322. |
| MLA | Katsaloulis, P,et al."Long-range correlations of RNA polymerase II promoter sequences across organisms".PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS 366.1(2006):308-322. |
入库方式： OAI收割
来源：理论物理研究所
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