A protein structural alphabet and its substitution matrix CLESUM
文献类型：期刊论文
| 作者 | Zheng, WM , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China.; Zheng, WM ; Liu, X
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| 刊名 | TRANSACTIONS ON COMPUTATIONAL SYSTEMS BIOLOGY II
 |
| 出版日期 | 2005 |
| 卷号 | 3680期号:1页码:59-67 |
| 关键词 | Hidden Markov Model Prediction Backbone |
| ISSN号 | 0302-9743 |
| 英文摘要 | By using a mixture model for the density distribution of the three psendobond angles formed by C-alpha atoms of four consecutive residues, the local structural states are discretized as 17 conformational letters of a protein structural alphabet. This coarse-graining procedure converts a 3D structure to a 1D code sequence. A substitution matrix between these letters is constructed based on the structural alignments of the PSSP database. |
| 学科主题 | Physics |
| WOS记录号 | WOS:000234378500004 |
| 公开日期 | 2012-08-30 |
| 源URL | [http://ir.itp.ac.cn/handle/311006/13925]  |
| 专题 | 理论物理研究所_理论物理所1978-2010年知识产出 |
| 通讯作者 | Zheng, WM , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China. |
| 推荐引用方式 GB/T 7714 | Zheng, WM , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China.,Zheng, WM,Liu, X. A protein structural alphabet and its substitution matrix CLESUM[J]. TRANSACTIONS ON COMPUTATIONAL SYSTEMS BIOLOGY II,2005,3680(1):59-67. |
| APA | Zheng, WM , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China.,Zheng, WM,&Liu, X.(2005).A protein structural alphabet and its substitution matrix CLESUM.TRANSACTIONS ON COMPUTATIONAL SYSTEMS BIOLOGY II,3680(1),59-67. |
| MLA | Zheng, WM , Acad Sinica, Inst Theoret Phys, Beijing 100080, Peoples R China.,et al."A protein structural alphabet and its substitution matrix CLESUM".TRANSACTIONS ON COMPUTATIONAL SYSTEMS BIOLOGY II 3680.1(2005):59-67. |
入库方式： OAI收割
来源：理论物理研究所
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