Prokaryote phylogeny based on ribosomal proteins and aminoacyl tRNA synthetases by using the compositional distance approach
文献类型：期刊论文
| 作者 | Qi, J; Wei, HB; Hao, BL; Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China. |
| 刊名 | SCIENCE IN CHINA SERIES C-LIFE SCIENCES
 |
| 出版日期 | 2004 |
| 卷号 | 47期号:4页码:313-321 |
| 关键词 | Methanopyrus-kandleri Gene-transfer Trees Methanogens Genome Domain Life |
| ISSN号 | 1006-9305 |
| 英文摘要 | In order to show that the newly developed K-string composition distance method, based on counting oligopeptide frequencies, for inferring phylogenetic relations of prokaryotes works equally well without requiring the whole proteome data, we used all ribosomal proteins and the set of aminoacyl tRNA synthetases for each species. The latter group has been known to yield inconsistent trees if used individually. Our trees are obtained without making any sequence alignment. Altogether 16 Archaea, 105 Bacteria and 2 Eucarya are represented on the tree. Most of the lower branchings agree well with the latest, 2003, Outline of the second edition of the Bergey's Manual of Systematic Bacteriology and the trees also suggest some relationships among higher taxa. |
| 学科主题 | Physics |
| URL标识 | 查看原文 |
| WOS记录号 | WOS:000224138900003 |
| 公开日期 | 2012-08-30 |
| 源URL | [http://ir.itp.ac.cn/handle/311006/14037]  |
| 专题 | 理论物理研究所_理论物理所1978-2010年知识产出 |
| 通讯作者 | Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China. |
| 推荐引用方式 GB/T 7714 | Qi, J,Wei, HB,Hao, BL,et al. Prokaryote phylogeny based on ribosomal proteins and aminoacyl tRNA synthetases by using the compositional distance approach[J]. SCIENCE IN CHINA SERIES C-LIFE SCIENCES,2004,47(4):313-321. |
| APA | Qi, J,Wei, HB,Hao, BL,&Hao, BL , Fudan Univ, T Life Res Ctr, Shanghai 200433, Peoples R China..(2004).Prokaryote phylogeny based on ribosomal proteins and aminoacyl tRNA synthetases by using the compositional distance approach.SCIENCE IN CHINA SERIES C-LIFE SCIENCES,47(4),313-321. |
| MLA | Qi, J,et al."Prokaryote phylogeny based on ribosomal proteins and aminoacyl tRNA synthetases by using the compositional distance approach".SCIENCE IN CHINA SERIES C-LIFE SCIENCES 47.4(2004):313-321. |
入库方式： OAI收割
来源：理论物理研究所
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