Recognition of Structure Similarities in Proteins
文献类型：期刊论文
| 作者 | Wang, Lin1; Qiu, Yuqing; Wang, Jiguang; Zhang, Xiangsun1
|
| 刊名 | JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY
 |
| 出版日期 | 2008-12-01 |
| 卷号 | 21期号:4页码:665-675 |
| 关键词 | Binding site alignment circular permutations flexible alignment protein structure alignment protein structure retrieval |
| ISSN号 | 1009-6124 |
| DOI | 10.1007/s11424-008-9143-5 |
| 英文摘要 | Protein fold structure is more conserved than its amino acid sequence and closely associated with biological function, so calculating the similarity of protein structures is a fundamental problem in structural biology and plays a key role in protein fold classification, fold function inference, and protein structure prediction. Large progress has been made in recent years in this field and many methods for considering structural similarity have been proposed, including methods for protein structure comparison, retrieval of protein structures from databases, and ligand binding site comparison. Most of those methods can be available on the World Wide Web, but evaluation of all the methods is still a hard problem. This paper summarizes some popular methods and latest methods for structure similarities, including structure alignment, protein structure retrieval, and ligand binding site alignment. |
| 资助项目 | National Natural Science Foundation of China under Key Research[10631070] ; JSPs ; JSPS-NSFC[10711140116] |
| WOS研究方向 | Mathematics |
| 语种 | 英语 |
| WOS记录号 | WOS:000260878200014 |
| 出版者 | SPRINGER HEIDELBERG |
| 源URL | [http://ir.amss.ac.cn/handle/2S8OKBNM/5617]  |
| 专题 | 应用数学研究所 |
| 通讯作者 | Wang, Lin |
| 作者单位 | 1.Chinese Acad Sci, Acad Math & Syst Sci, Beijing 100190, Peoples R China 2.Chinese Acad Sci, Grad Sch, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Wang, Lin,Qiu, Yuqing,Wang, Jiguang,et al. Recognition of Structure Similarities in Proteins[J]. JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY,2008,21(4):665-675. |
| APA | Wang, Lin,Qiu, Yuqing,Wang, Jiguang,&Zhang, Xiangsun.(2008).Recognition of Structure Similarities in Proteins.JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY,21(4),665-675. |
| MLA | Wang, Lin,et al."Recognition of Structure Similarities in Proteins".JOURNAL OF SYSTEMS SCIENCE & COMPLEXITY 21.4(2008):665-675. |
入库方式： OAI收割
来源：数学与系统科学研究院
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