Genome-Wide Identification and Expression Analysis of the Cation Diffusion Facilitator Gene Family in Turnip Under Diverse Metal Ion Stresses
文献类型：期刊论文
| 作者 | Li, Xiong1,2 ; Wu, Yuansheng3,4; Li, Boqun1,2; He, Wenqi5; Yang, Yonghong3,4; Yang, Yongping1,2
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| 刊名 | FRONTIERS IN GENETICS
 |
| 出版日期 | 2018-04-04 |
| 卷号 | 9页码:103 |
| 关键词 | Phylogenetic Analysis Protein Domain Metallic Element Ion Transport Gene Expression |
| ISSN号 | 1664-8021 |
| DOI | 10.3389/fgene.2018.00103 |
| 英文摘要 | The cation diffusion facilitator (CDF) family is one of the gene families involved in metal ion uptake and transport in plants, but the understanding of the definite roles and mechanisms of most CDF genes remain limited. In the present study, we identified 18 candidate CDF genes from the turnip genome and named them BrrMTP1.1-BrrMTP12. Then, we performed a comparative genomic analysis on the phylogenetic relationships, gene structures and chromosome distributions, conserved domains, and motifs of turnip CDFs. The constructed phylogenetic tree indicated that the BrrMTPs were divided into seven groups (groups 1, 5, 6, 7, 8, 9, and 12) and formed three major clusters (Zn-CDFs, Fe/Zn-CDFs, and Mn-CDFs). Moreover, the structural characteristics of the BrrMTP members in the same group were similar but varied among groups. To investigate the potential roles of BrrMTPs in turnip, we conducted an expression analysis on all BrrMTP genes under Mg, Zn, Cu, Mn, Fe, Co, Na, and Cd stresses. Results showed that the expression levels of all BrrMTP members were induced by at least one metal ion, indicating that these genes may be related to the tolerance or transport of those metal ions. Based on the roles of different metal ions for plants, we hypothesized that BrrMTP genes are possibly involved in heavy metal accumulation and tolerance to salt stress apart from their roles in the maintenance of mineral nutrient homeostasis in turnip. These findings are helpful to understand the roles of MTPs in plants and provide preliminary information for the study of the functions of BrrMTP genes. |
| 语种 | 英语 |
| WOS记录号 | WOS:000429260900001 |
| 源URL | [http://ir.kib.ac.cn/handle/151853/60435]  |
| 专题 | 昆明植物研究所_植物化学与西部植物资源持续利用国家重点实验室 |
| 作者单位 | 1.Chinese Acad Sci, Kunming Inst Bot, Key Lab Plant Div & Biogeog East Asia, Kunming, Yunnan, Peoples R China 2.Chinese Acad Sci, Kunming Inst Bot, China Germplasm Bank Wild Species, Kunming, Yunnan, Peoples R China 3.Yunnan Agr Univ, Educ Minist China, Key Lab Agrobiodivers & Pest Management, Kunming, Yunnan, Peoples R China 4.Yunnan Agr Univ, Coll Plant Protect, Kunming, Yunnan, Peoples R China 5.Jishou Univ, Coll Biol & Environm Sci, Jishou, Peoples R China |
| 推荐引用方式 GB/T 7714 | Li, Xiong,Wu, Yuansheng,Li, Boqun,et al. Genome-Wide Identification and Expression Analysis of the Cation Diffusion Facilitator Gene Family in Turnip Under Diverse Metal Ion Stresses[J]. FRONTIERS IN GENETICS,2018,9:103. |
| APA | Li, Xiong,Wu, Yuansheng,Li, Boqun,He, Wenqi,Yang, Yonghong,&Yang, Yongping.(2018).Genome-Wide Identification and Expression Analysis of the Cation Diffusion Facilitator Gene Family in Turnip Under Diverse Metal Ion Stresses.FRONTIERS IN GENETICS,9,103. |
| MLA | Li, Xiong,et al."Genome-Wide Identification and Expression Analysis of the Cation Diffusion Facilitator Gene Family in Turnip Under Diverse Metal Ion Stresses".FRONTIERS IN GENETICS 9(2018):103. |
入库方式： OAI收割
来源：昆明植物研究所
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