Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant
文献类型：期刊论文
| 作者 | Wang, Wen-Cai2; Chen, Si-Yun3; Zhang, Xian-Zhi1
|
| 刊名 | CONSERVATION GENETICS RESOURCES
 |
| 出版日期 | 2017-09-01 |
| 卷号 | 9期号:3页码:439-442 |
| 关键词 | Elaeagnus Mollis Chloroplast Genome Phylogenomics Conservation |
| ISSN号 | 1877-7252 |
| DOI | 10.1007/s12686-017-0706-4 |
| 英文摘要 | Elaeagnus mollis is a rare and endangered oil tree species endemic to China. Here we assembled and characterized its whole chloroplast (cp) genome using Illumina pair-end sequencing data. The E. mollis cp genome was 151,428 bp in length, containing a large single copy region (LSC) of 81,003 bp and a small single copy region (SSC) of 18,561 bp separated by a pair of inverted repeats (IRs) of 25,932 bp. The genome possessed 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Most of genes occurred as single-copy, while 18 gene species had two copies. The overall GC content of the E. mollis cp genome was 37.0%, and the corresponding values of LSC, SSC and IR regions were 35.0, 30.3 and 42.2%, respectively. The phylogenomic analysis revealed that E. mollis clustered with E. macrophylla in Elaeagnaceae, which was closely related to Moraceae and Cannabaceae belonging to Rosales. |
| 学科主题 | Biodiversity Conservation ; Genetics & Heredity |
| 语种 | 英语 |
| WOS记录号 | WOS:000407231600023 |
| 源URL | [http://ir.kib.ac.cn/handle/151853/54910]  |
| 专题 | 昆明植物研究所_中国西南野生生物种质资源库 |
| 作者单位 | 1.Northwest A&F Univ, Coll Forestry, Yangling 712100, Shaanxi, Peoples R China 2.Queen Mary Univ London, Sch Biol & Chem Sci, Mile End Rd, London E1 4NS, England 3.Chinese Acad Sci, Kunming Inst Bot, Germplasm Bank Wild Species, Kunming 650201, Yunnan, Peoples R China |
| 推荐引用方式 GB/T 7714 | Wang, Wen-Cai,Chen, Si-Yun,Zhang, Xian-Zhi. Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant[J]. CONSERVATION GENETICS RESOURCES,2017,9(3):439-442. |
| APA | Wang, Wen-Cai,Chen, Si-Yun,&Zhang, Xian-Zhi.(2017).Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant.CONSERVATION GENETICS RESOURCES,9(3),439-442. |
| MLA | Wang, Wen-Cai,et al."Characterization of the complete chloroplast genome of Elaeagnus mollis, a rare and endangered oil plant".CONSERVATION GENETICS RESOURCES 9.3(2017):439-442. |
入库方式： OAI收割
来源：昆明植物研究所
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