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Chinese Academy of Sciences Institutional Repositories Grid
Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing

文献类型:期刊论文

作者Yingang Feng
刊名Plos One
出版日期2017-12-12
卷号12期号:12页码:e0189700
DOI10.1371/journal.pone.0189700
文献子类Article
英文摘要The use of NMR methods to determine the three-dimensional structures of carbohydrates and glycoproteins is still challenging, in part because of the lack of standard protocols. In order to increase the convenience of structure determination, the topology and parameter files for carbohydrates in the program Crystallography & NMR System (CNS) were investigated and new files were developed to be compatible with the standard simulated annealing protocols for proteins and nucleic acids. Recalculating the published structures of protein-carbohydrate complexes and glycosylated proteins demonstrates that the results are comparable to the published structures which employed more complex procedures for structure calculation. Integrating the new carbohydrate parameters into the standard structure calculation protocol will facilitate three-dimensional structural study of carbohydrates and glycosylated proteins by NMR spectroscopy.
语种英语
WOS记录号WOS:000417698200065
源URL[http://ir.qibebt.ac.cn/handle/337004/9860]  
专题青岛生物能源与过程研究所_代谢物组学团队
通讯作者Yingang Feng
作者单位中国科学院青岛生物能源与过程研究所
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GB/T 7714
Yingang Feng. Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing[J]. Plos One,2017,12(12):e0189700.
APA Yingang Feng.(2017).Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing.Plos One,12(12),e0189700.
MLA Yingang Feng."Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing".Plos One 12.12(2017):e0189700.

入库方式: OAI收割

来源:青岛生物能源与过程研究所

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