Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing
文献类型：期刊论文
| 作者 | Yingang Feng |
| 刊名 | Plos One
 |
| 出版日期 | 2017-12-12 |
| 卷号 | 12期号:12页码:e0189700 |
| DOI | 10.1371/journal.pone.0189700 |
| 文献子类 | Article |
| 英文摘要 | The use of NMR methods to determine the three-dimensional structures of carbohydrates and glycoproteins is still challenging, in part because of the lack of standard protocols. In order to increase the convenience of structure determination, the topology and parameter files for carbohydrates in the program Crystallography & NMR System (CNS) were investigated and new files were developed to be compatible with the standard simulated annealing protocols for proteins and nucleic acids. Recalculating the published structures of protein-carbohydrate complexes and glycosylated proteins demonstrates that the results are comparable to the published structures which employed more complex procedures for structure calculation. Integrating the new carbohydrate parameters into the standard structure calculation protocol will facilitate three-dimensional structural study of carbohydrates and glycosylated proteins by NMR spectroscopy. |
| 语种 | 英语 |
| WOS记录号 | WOS:000417698200065 |
| 源URL | [http://ir.qibebt.ac.cn/handle/337004/9860]  |
| 专题 | 青岛生物能源与过程研究所_代谢物组学团队 |
| 通讯作者 | Yingang Feng |
| 作者单位 | 中国科学院青岛生物能源与过程研究所 |
| 推荐引用方式 GB/T 7714 | Yingang Feng. Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing[J]. Plos One,2017,12(12):e0189700. |
| APA | Yingang Feng.(2017).Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing.Plos One,12(12),e0189700. |
| MLA | Yingang Feng."Compatible topologies and parameters for NMR structure determination of carbohydrates by simulated annealing".Plos One 12.12(2017):e0189700. |
入库方式： OAI收割
来源：青岛生物能源与过程研究所
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