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Tree of life for the genera of Chinese vascular plants

文献类型：期刊论文

作者Lu, An-Ming13; Zhang, Shou-Zhou11,12; Li, Jian-Hua3; Gao, Tian-Gang13; Chen, You-Sheng13; Jin, Xiao-Hua13; Wang, Xiao-Quan13; Ran, Jin-Hua13; Zhou, Shi-Liang13; Soltis, Pamela S.4,5
刊名JOURNAL OF SYSTEMATICS AND EVOLUTION
出版日期2016-07-01
卷号54期号:4页码:277-306
关键词China DarwinTree megaphylogeny regional tree of life SoTree vascular plants
ISSN号1674-4918
DOI10.1111/jse.12219
英文摘要We reconstructed a phylogenetic tree of Chinese vascular plants (Tracheophyta) using sequences of the chloroplast genes atpB, matK, ndhF, and rbcL and mitochondrial matR. We produced a matrix comprising 6098 species and including 13 695 DNA sequences, of which 1803 were newly generated. Our taxonomic sampling spanned 3114 genera representing 323 families of Chinese vascular plants, covering more than 93% of all genera known from China. The comprehensive large phylogeny supports most relationships among and within families recognized by recent molecular phylogenetic studies for lycophytes, ferns (monilophytes), gymnosperms, and angiosperms. For angiosperms, most families in Angiosperm Phylogeny Group IV are supported as monophyletic, except for a paraphyletic Dipterocarpaceae and Santalaceae. The infrafamilial relationships of several large families and monophyly of some large genera are well supported by our dense taxonomic sampling. Our results showed that two species of Eberhardtia are sister to a clade formed by all other taxa of Sapotaceae, except Sarcosperma. We have made our phylogeny of Chinese vascular plants publically available for the creation of subtrees via SoTree (http://www.darwintree.cn/flora/index.shtml), an automated phylogeny assembly tool for ecologists.
资助项目National Natural Science Foundation of China[31590822] ; National Key Basic Research Program of China[2014CB954100] ; National Key Basic Research Program of China[31270268] ; National Key Basic Research Program of China[31270269] ; Chinese Academy of Sciences International Institution Development Program[SAJC201315] ; Shenzhen Science and Technology Innovation Council Funding[KQC 201105310009A] ; Science and Technology Basic Work[2013FY112100] ; Chinese Academy of Sciences External Cooperation Program of BIC[GJHZ201321] ; Chinese Academy of Sciences Visiting Professorship for Senior International Scientists[2011T1S24] ; US National Science Foundation for Open tree[DEB-1208428] ; iDigBio[EF-1115210]
WOS研究方向Plant Sciences
语种英语
WOS记录号WOS:000383771900002
出版者WILEY-BLACKWELL
源URL[http://202.127.146.157/handle/2RYDP1HH/49]  
专题中国科学院武汉植物园
通讯作者Lu, An-Ming; Zhang, Shou-Zhou; Chen, Zhi-Duan
作者单位1.Univ Florida, Dept Biol, Gainesville, FL 32611 USA
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
3.Hope Coll, Dept Biol, Holland, MI 49423 USA
4.Univ Florida, Genet Inst, Gainesville, FL 32610 USA
5.Univ Florida, Florida Museum Nat Hist, Gainesville, FL 32611 USA
6.Taiwan Forestry Res Inst, Dept Bot, 20 Nan Hai Rd, Taipei 100, Taiwan
7.Chinese Acad Sci, Wuhan Bot Garden, Wuhan 430074, Peoples R China
8.Orchid Conservat & Res Ctr Shenzhen, Shenzhen 518114, Peoples R China
9.Shanxi Normal Univ, Coll Life Sci, Linfen 041004, Peoples R China
10.Chinese Acad Sci, Comp Network Informat Ctr, Beijing 100190, Peoples R China
推荐引用方式
GB/T 7714		 Lu, An-Ming,Zhang, Shou-Zhou,Li, Jian-Hua,et al. Tree of life for the genera of Chinese vascular plants[J]. JOURNAL OF SYSTEMATICS AND EVOLUTION,2016,54(4):277-306.
APA Lu, An-Ming.,Zhang, Shou-Zhou.,Li, Jian-Hua.,Gao, Tian-Gang.,Chen, You-Sheng.,...&Chen, Zhi-Duan.(2016).Tree of life for the genera of Chinese vascular plants.JOURNAL OF SYSTEMATICS AND EVOLUTION,54(4),277-306.
MLA Lu, An-Ming,et al."Tree of life for the genera of Chinese vascular plants".JOURNAL OF SYSTEMATICS AND EVOLUTION 54.4(2016):277-306.

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来源：武汉植物园

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