The first complete plastome sequence of the basal asterid family Styracaceae (Ericales) reveals a large inversion
文献类型：期刊论文
| 作者 | Yan, Minghui1,3; Moore, Michael J.2; Meng, Aiping1; Yao, Xiaohong1; Wang, Hengchang1 |
| 刊名 | PLANT SYSTEMATICS AND EVOLUTION
 |
| 出版日期 | 2017 |
| 卷号 | 303期号:1页码:61-70 |
| 关键词 | Alniphyllum eberhardtii Ericales Inversion Phylogenomics Plastome Styracaceae |
| ISSN号 | 0378-2697 |
| DOI | 10.1007/s00606-016-1352-0 |
| 英文摘要 | Plastome sequences are rich sources of information for resolving difficult phylogenetic relationships and provide genomic data for conservation studies. Here, the complete plastome sequence of Alniphyllum eberhardtii Guillaumin is reported, representing the first plastome of the basal asterid family Styracaceae (Ericales). The plastome is 155,384 bp in length and contains 79 protein-coding genes, 30 tRNA genes and 4 rRNA genes, totaling 113 unique genes with 19 genes in the inverted repeat region. Unusual features of the plastome include the presence a large 20-kb inversion in the Large Single-Copy region, the pseudogenization of the accD gene, and the loss of the second intron from clpP. The 20-kb inversion includes 14 genes and has not been previously reported in other Ericales plastomes. Thirty-nine plastid simple sequence repeats (SSRs) that may provide genetic resources for the conservation of this economically import timber plant are characterized. Phylogenetic results inferred from ML and MP analyses of 66 plastid genes and 26 taxa reveal that the Styracaceae are sister to a clade including Actinidiaceae and Ericaceae and suggest that complete plastomes are likely to be very helpful in resolving the basal relationships among Ericales families, which have resisted resolution in smaller phylogenetic data sets. |
| 资助项目 | National Natural Science Foundation of China[31370223] ; National Natural Science Foundation of China[31070191] |
| WOS研究方向 | Plant Sciences ; Evolutionary Biology |
| 语种 | 英语 |
| WOS记录号 | WOS:000393648500006 |
| 出版者 | SPRINGER WIEN |
| 源URL | [http://202.127.146.157/handle/2RYDP1HH/1431]  |
| 专题 | 中国科学院武汉植物园 |
| 通讯作者 | Wang, Hengchang |
| 作者单位 | 1.Chinese Acad Sci, Wuhan Bot Garden, Key Lab Plant Germplasm Enhancement & Specialty A, Wuhan, Hubei, Peoples R China 2.Oberlin Coll, Dept Biol, Oberlin, OH 44074 USA 3.Univ Chinese Acad Sci, Beijing, Peoples R China |
| 推荐引用方式 GB/T 7714 | Yan, Minghui,Moore, Michael J.,Meng, Aiping,et al. The first complete plastome sequence of the basal asterid family Styracaceae (Ericales) reveals a large inversion[J]. PLANT SYSTEMATICS AND EVOLUTION,2017,303(1):61-70. |
| APA | Yan, Minghui,Moore, Michael J.,Meng, Aiping,Yao, Xiaohong,&Wang, Hengchang.(2017).The first complete plastome sequence of the basal asterid family Styracaceae (Ericales) reveals a large inversion.PLANT SYSTEMATICS AND EVOLUTION,303(1),61-70. |
| MLA | Yan, Minghui,et al."The first complete plastome sequence of the basal asterid family Styracaceae (Ericales) reveals a large inversion".PLANT SYSTEMATICS AND EVOLUTION 303.1(2017):61-70. |
入库方式： OAI收割
来源：武汉植物园
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