Molecular phylogeny of the fishes traditionally referred to Cyprinini sensu stricto (Teleostei: Cypriniformes)
文献类型：期刊论文
| 作者 | Yang, Lei1; Mayden, Richard L.1; Sado, Tetsuya2; He, Shunping3; Saitoh, Kenji4; Miya, Masaki2 |
| 刊名 | ZOOLOGICA SCRIPTA
 |
| 出版日期 | 2010-11-01 |
| 卷号 | 39期号:6页码:527-550 |
| 关键词 | SEQUENCE ALIGNMENT MIXED MODELS INTERRELATIONSHIPS ACTINOPTERYGII SUBSTITUTION OSTARIOPHYSI EVOLUTION BOOTSTRAP INFERENCE PRIMERS |
| ISSN号 | 0300-3256 |
| 通讯作者 | Mayden, RL, St Louis Univ, Dept Biol, 3507 Laclede Ave, St Louis, MO 63103 USA |
| 中文摘要 | Carps (e.g. Koi) of the genus Cyprinus and Crucian carps (e.g. Goldfish) of the genus Carassius are among the most popular freshwater fishes around the world. However, their phylogenetic positions within the subfamily Cyprininae, relationships with their allies (e.g. Procypris, Carassioides), and the monophyly of the group formed by them and their allies, which is referred as the tribe Cyprinini sensu stricto, are far from clear. Historically, the Cyprinini was defined by different people according to whether a cyprinine fish possessed a spinous anal-fin ray (or anal spine), the spine was serrated or not, and occasionally, the number of branched dorsal-fin rays. Some definitions were established without providing any diagnostic characters. In this study, we investigated the monophyly of the tribe Cyprinini sensu stricto, based on four different historical definitions, and explored the phylogenetic relationships of these members in the subfamily Cyprininae. Using five mitochondrial genes as markers, both maximum-likelihood and Bayesian trees were constructed using the optimal partitioning strategy. Both analyses successfully resolved a monophyletic Cyprininae and recovered seven major clades from this subfamily. The diagnosis limiting the tribe Cyprinini sensu stricto to four genera, Cyprinus, Carassius, Carassioides and Procypris, received most support. We propose that only those cyprinines that possess a serrated anal spine and have no < 10 branched dorsal-fin rays should be considered members of this tribe. Cyprinini is sister to the Sinocyclocheilus clade, a group traditionally considered a barbin, and together they form the 'Cyprinini-Sinocyclocheilus' clade. Procypris forms the basal clade of the Cyprinini, whereas species of Carassius and Carassioides locate at the top. |
| 英文摘要 | Carps (e.g. Koi) of the genus Cyprinus and Crucian carps (e.g. Goldfish) of the genus Carassius are among the most popular freshwater fishes around the world. However, their phylogenetic positions within the subfamily Cyprininae, relationships with their allies (e.g. Procypris, Carassioides), and the monophyly of the group formed by them and their allies, which is referred as the tribe Cyprinini sensu stricto, are far from clear. Historically, the Cyprinini was defined by different people according to whether a cyprinine fish possessed a spinous anal-fin ray (or anal spine), the spine was serrated or not, and occasionally, the number of branched dorsal-fin rays. Some definitions were established without providing any diagnostic characters. In this study, we investigated the monophyly of the tribe Cyprinini sensu stricto, based on four different historical definitions, and explored the phylogenetic relationships of these members in the subfamily Cyprininae. Using five mitochondrial genes as markers, both maximum-likelihood and Bayesian trees were constructed using the optimal partitioning strategy. Both analyses successfully resolved a monophyletic Cyprininae and recovered seven major clades from this subfamily. The diagnosis limiting the tribe Cyprinini sensu stricto to four genera, Cyprinus, Carassius, Carassioides and Procypris, received most support. We propose that only those cyprinines that possess a serrated anal spine and have no < 10 branched dorsal-fin rays should be considered members of this tribe. Cyprinini is sister to the Sinocyclocheilus clade, a group traditionally considered a barbin, and together they form the 'Cyprinini-Sinocyclocheilus' clade. Procypris forms the basal clade of the Cyprinini, whereas species of Carassius and Carassioides locate at the top. |
| WOS标题词 | Science & Technology ; Life Sciences & Biomedicine |
| 学科主题 | Zoology |
| 类目[WOS] | Evolutionary Biology ; Zoology |
| 研究领域[WOS] | Evolutionary Biology ; Zoology |
| 关键词[WOS] | SEQUENCE ALIGNMENT ; MIXED MODELS ; INTERRELATIONSHIPS ; ACTINOPTERYGII ; SUBSTITUTION ; OSTARIOPHYSI ; EVOLUTION ; BOOTSTRAP ; INFERENCE ; PRIMERS |
| 收录类别 | SCI |
| 资助信息 | USA National Science Foundation Cypriniformes Tree of Life initiative (CToL) [EF 0431326]; Saint Louis University ; Department of Biology and Graduate School |
| 语种 | 英语 |
| WOS记录号 | WOS:000283377800002 |
| 公开日期 | 2010-12-23 |
| 源URL | [http://ir.ihb.ac.cn/handle/342005/13455]  |
| 专题 | 水生生物研究所_水生生物多样性与资源保护研究中心_期刊论文 |
| 作者单位 | 1.St Louis Univ, Dept Biol, St Louis, MO 63103 USA 2.Nat Hist Museum & Inst, Dept Zool, Chuo Ku, Chiba 2608682, Japan 3.Chinese Acad Sci, Inst Hydrobiol, Lab Fish Phylogenet & Biogeog, Wuhan 430072, Peoples R China 4.Fisheries Res Agcy, Natl Res Inst Fisheries Sci, Yokohama, Kanagawa 2368648, Japan |
| 推荐引用方式 GB/T 7714 | Yang, Lei,Mayden, Richard L.,Sado, Tetsuya,et al. Molecular phylogeny of the fishes traditionally referred to Cyprinini sensu stricto (Teleostei: Cypriniformes)[J]. ZOOLOGICA SCRIPTA,2010,39(6):527-550. |
| APA | Yang, Lei,Mayden, Richard L.,Sado, Tetsuya,He, Shunping,Saitoh, Kenji,&Miya, Masaki.(2010).Molecular phylogeny of the fishes traditionally referred to Cyprinini sensu stricto (Teleostei: Cypriniformes).ZOOLOGICA SCRIPTA,39(6),527-550. |
| MLA | Yang, Lei,et al."Molecular phylogeny of the fishes traditionally referred to Cyprinini sensu stricto (Teleostei: Cypriniformes)".ZOOLOGICA SCRIPTA 39.6(2010):527-550. |
入库方式： OAI收割
来源：水生生物研究所
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