The phylogenetic relationship of the family Lutjanidae based on analyses of AFLP and mitochondrial 12S rRNA sequences
文献类型：期刊论文
| 作者 | Zhang, JB ; Liu, X |
| 刊名 | CHINESE SCIENCE BULLETIN
 |
| 出版日期 | 2006 |
| 卷号 | 51期号:Suppl. 2页码:143-148 |
| 关键词 | Lutjanidae phylogeny genome mitochondrion 12S rRNA AFLP |
| ISSN号 | 1001-6538 |
| 通讯作者 | jbzhang30@vip.sina.com |
| 中文摘要 | Fishes of the family Lutjanidae are commercially important in South China Sea. However, the phylogeny of Lutjanids is still unclear and there are many controversies over it. Herein, studies about the phylogeny of Lutjanids were performed based on Amplified Fragment Length Polymorphism (AFLP) analysis of genome DNA and sequence analysis of mitochondrial 12S rRNA gene, and 10 Lutjanidae species and 1 Lethrinidae species were employed. The topologies of minimum evolution (ME) trees based on the two analyses respectively were congruent except for positions of genera Pristipomoides and Caesio. The optimal substitution model TrN + G for DNA sequences of 12S rRNA genes in Lutjanids was obtained using MODELTEST 3.6 software and maximum likelihood (ML) analysis supports the topology displayed by the ME tree. The test of log-likelihood suggests that the use of molecular clock calibrations to estimate species divergence time appeared valid. Phylogenetic analyses using AFLP data and DNA sequences of mitochondrial 12S rRNA genes indicated the monophyly of Lutjanus genra. However, further studies are required to reveal the phylogenetic relationship among other genera. In addition, the results demonstrated that AFLP genetic marker was suitable for the phylogenetic analysis of Lutjanids. |
| 学科主题 | Multidisciplinary Sciences |
| 收录类别 | SCI |
| 原文出处 | SCIENCE CHINA PRESS |
| WOS记录号 | WOS:000244074100019 |
| 公开日期 | 2011-07-03 |
| 源URL | [http://ir.scsio.ac.cn/handle/344004/5757]  |
| 专题 | 南海海洋研究所_热带海洋环境国家重点实验室(LTO) |
| 推荐引用方式 GB/T 7714 | Zhang, JB,Liu, X. The phylogenetic relationship of the family Lutjanidae based on analyses of AFLP and mitochondrial 12S rRNA sequences[J]. CHINESE SCIENCE BULLETIN,2006,51(Suppl. 2):143-148. |
| APA | Zhang, JB,&Liu, X.(2006).The phylogenetic relationship of the family Lutjanidae based on analyses of AFLP and mitochondrial 12S rRNA sequences.CHINESE SCIENCE BULLETIN,51(Suppl. 2),143-148. |
| MLA | Zhang, JB,et al."The phylogenetic relationship of the family Lutjanidae based on analyses of AFLP and mitochondrial 12S rRNA sequences".CHINESE SCIENCE BULLETIN 51.Suppl. 2(2006):143-148. |
入库方式： OAI收割
来源：南海海洋研究所
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