Stereotaxic f-18-fdg pet and mri templates with three-dimensional digital atlas for statistical parametric mapping analysis of tree shrew brain
文献类型：期刊论文
| 作者 | Huang, Qi1,2,3; Nie, Binbin1,2; Ma, Chen4,5,6; Wang, Jing7; Zhang, Tianhao1,2,3; Duan, Shaofeng1,2,3; Wu, Shang1,2,8; Liang, Shengxiang1,2,8; Li, Panlong1,2,8; Liu, Hua1,2 |
| 刊名 | Journal of neuroscience methods
 |
| 出版日期 | 2018 |
| 卷号 | 293页码:105-116 |
| ISSN号 | 0165-0270 |
| 关键词 | Tree shrew Brain Template Digital atlas Positron emission tomography Magnetic resonance imaging |
| DOI | 10.1016/j.jneumeth.2017.09.006 |
| 通讯作者 | Zhou, jiangning(jnzhou@ustc.edu.cn) ; Xu, lin(lxu@vip.163.com) ; Shan, baoci(shanbc@ihep.ac.cn) |
| 英文摘要 | Background: tree shrews are proposed as an alternative animal model to nonhuman primates due to their close affinity to primates. neuroimaging techniques are widely used to study brain functions and structures of humans and animals. however, tree shrews are rarely applied in neuroimaging field partly due to the lack of available species specific analysis methods. new method: in this study, 10 pet/ct and 10 mri images of tree shrew brain were used to construct pet and mri templates; based on histological atlas we reconstructed a three-dimensional digital atlas with 628 structures delineated; then the digital atlas and templates were aligned into a stereotaxic space. finally, we integrated the digital atlas and templates into a toolbox for tree shrew brain spatial normalization, statistical analysis and results localization. results: we validated the feasibility of the toolbox by simulated data with lesions in laterodorsal thalamic nucleus (ld). the lesion volumes of simulated pet and mri images were (12.97 +/- 3.91) mm(3) and (7.04 +/- 0.84) mm(3). statistical results at p < 0.005 showed the lesion volumes of pet and mri were 13.18 mm(3) and 8.06 mm(3) in ld. comparison with existing method(s): to our knowledge, we report the first pet template and digital atlas of tree shrew brain. compared to the existing mri templates, our mri template was aligned into stereotaxic space. and the toolbox is the first software dedicated for tree shrew brain analysis. conclusions: the templates and digital atlas of tree shrew brain, as well as the toolbox, facilitate the use of tree shrews in neuroimaging field. (c) 2017 elsevier b.v. all rights reserved. |
| WOS关键词 | POSITRON-EMISSION-TOMOGRAPHY ; PRIMARY VISUAL-CORTEX ; SMALL-ANIMAL PET ; RAT-BRAIN ; TUPAIA-BELANGERI ; WHITE-MATTER ; REGISTRATION ; IMAGES ; VALIDATION ; PRIMATES |
| WOS研究方向 | Biochemistry & Molecular Biology ; Neurosciences & Neurology |
| WOS类目 | Biochemical Research Methods ; Neurosciences |
| 语种 | 英语 |
| 出版者 | ELSEVIER SCIENCE BV |
| WOS记录号 | WOS:000418211200013 |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2177835 |
| 专题 | 高能物理研究所 |
| 通讯作者 | Zhou, Jiangning; Xu, Lin; Shan, Baoci |
| 作者单位 | 1.Chinese Acad Sci, Inst High Energy Phys, Div Nucl Technol & Applicat, Beijing 100049, Peoples R China 2.Beijing Engn Res Ctr Radiog Tech & Equipment, Beijing 100049, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 4.Chinese Acad Sci, Kunming Inst Zool, Key Lab Anim Models & Human Dis Mech, Kunming 650223, Yunnan, Peoples R China 5.Chinese Acad Sci, Kunming Inst Zool, Lab Learning & Memory, Kunming 650223, Yunnan, Peoples R China 6.Univ Chinese Acad Sci, Kunming Coll Life Sci, Kunming 650223, Yunnan, Peoples R China 7.Nanjing Med Univ, Dept Neurobiol, Nanjing 211166, Jiangsu, Peoples R China 8.Zhengzhou Univ, Phys Sci & Technol Coll, Zhengzhou 450052, Henan, Peoples R China 9.Kunming Med Univ, Affiliated Hosp 3, Yunnan Tumor Hosp, PET CT Ctr, Kunming 650118, Yunnan, Peoples R China 10.Soochow Univ, Coll Pharmaceut Sci, KIZ SU Joint Lab Anim Model & Drug Dev, Suzhou 215123, Peoples R China |
| 推荐引用方式 GB/T 7714 | Huang, Qi,Nie, Binbin,Ma, Chen,et al. Stereotaxic f-18-fdg pet and mri templates with three-dimensional digital atlas for statistical parametric mapping analysis of tree shrew brain[J]. Journal of neuroscience methods,2018,293:105-116. |
| APA | Huang, Qi.,Nie, Binbin.,Ma, Chen.,Wang, Jing.,Zhang, Tianhao.,...&Shan, Baoci.(2018).Stereotaxic f-18-fdg pet and mri templates with three-dimensional digital atlas for statistical parametric mapping analysis of tree shrew brain.Journal of neuroscience methods,293,105-116. |
| MLA | Huang, Qi,et al."Stereotaxic f-18-fdg pet and mri templates with three-dimensional digital atlas for statistical parametric mapping analysis of tree shrew brain".Journal of neuroscience methods 293(2018):105-116. |
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