The complete chloroplast genome of Amygdalus mira (Rosaceae) a threatened wild Chinese peach
文献类型：期刊论文
| 作者 | Han, Yuepeng1,4; Wang, Lu1,4; Zhou, Hui1,4; Magdy, Mahmoud2; Amar, Mohamed Hamdy3,4 |
| 刊名 | CONSERVATION GENETICS RESOURCES
 |
| 出版日期 | 2018-12-01 |
| 卷号 | 10期号:4页码:801-803 |
| 关键词 | Amygdalus mira Chloroplast genome Inverted repeats IGS CDS tRNAs rRNAs SSR motifs |
| ISSN号 | 1877-7252 |
| DOI | 10.1007/s12686-017-0934-7 |
| 英文摘要 | Amygdalus mira (Koehne) Ricker (Basionym: Prunus mira Koehne) is a wild relative species of peach belonging to Rosaceae family. It is likely the oldest progenitor of peach and considered threatened or even on the verge of extinction, which requires urgent conservation attention. To contribute to such efforts, complete chloroplast genome of A. mira was assembled using Illumina Hiseq 2500 platform. The cpDNA genome is 157,330 bp in length and has a GC content of 36.80%, with a typical circular quadripartite structure comprising a pair of inverted repeats (IRA and IRB) separated by two single-copy regions. The cpDNA genome consisted of 88 coding sequences (CDS), 37 tRNAs and 8 rRNAs genes. 583 simple sequence repeat (SSR) motifs were identified, where hexa-nucleotide was the most common (27.7% of all SSRs). The complete cpDNA genome of A. mira will be of valuable data for the upcoming research on comparative population genomics of peach. |
| 资助项目 | China Agriculture Research System[CARS-30] ; Overseas Construction Plan for Science and Education Base, China-Africa Center for Research and Education, Chinese Academy of Sciences[SAJC201327] ; Talented Young Scientist Program (TYSP) of the Chinese Ministry of Science and Technology (CMST)[EG-16-005] |
| WOS研究方向 | Biodiversity & Conservation ; Genetics & Heredity |
| 语种 | 英语 |
| WOS记录号 | WOS:000456651300047 |
| 出版者 | SPRINGER |
| 源URL | [http://202.127.146.157/handle/2RYDP1HH/6202]  |
| 专题 | 中国科学院武汉植物园 |
| 通讯作者 | Han, Yuepeng |
| 作者单位 | 1.Chinese Acad Sci, Sinoafrican Joint Res Ctr, Wuhan 430074, Hubei, Peoples R China 2.Ain Shams Univ, Genet Dept, Fac Agr, Cairo, Egypt 3.Desert Res Ctr, Egyptian Deserts Gene Bank, Cairo, Egypt 4.Chinese Acad Sci, Key Lab Plant Germplasm Enhancement & Specialty A, Wuhan Bot Garden, Wuhan 430074, Hubei, Peoples R China |
| 推荐引用方式 GB/T 7714 | Han, Yuepeng,Wang, Lu,Zhou, Hui,et al. The complete chloroplast genome of Amygdalus mira (Rosaceae) a threatened wild Chinese peach[J]. CONSERVATION GENETICS RESOURCES,2018,10(4):801-803. |
| APA | Han, Yuepeng,Wang, Lu,Zhou, Hui,Magdy, Mahmoud,&Amar, Mohamed Hamdy.(2018).The complete chloroplast genome of Amygdalus mira (Rosaceae) a threatened wild Chinese peach.CONSERVATION GENETICS RESOURCES,10(4),801-803. |
| MLA | Han, Yuepeng,et al."The complete chloroplast genome of Amygdalus mira (Rosaceae) a threatened wild Chinese peach".CONSERVATION GENETICS RESOURCES 10.4(2018):801-803. |
入库方式： OAI收割
来源：武汉植物园
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