Inter-simple sequence repeat (ISSR) analysis of genetic variation of Chondrus crispus populations from North Atlantic
文献类型：期刊论文
| 作者 | Wang, Xiuliang1; Zhao, Fengjuan1; Hu, Zimin2; Critchley, Alan T.3; Morrell, Steve L.; Duan, Delin1 |
| 刊名 | AQUATIC BOTANY
 |
| 出版日期 | 2008-02-01 |
| 卷号 | 88期号:2页码:154-159 |
| 关键词 | Rhodophyta Chondrus Crispus Stackhouse Population Genetic Variation Geographic Distance Issr Amova Mantel Test |
| ISSN号 | 0304-3770 |
| DOI | 10.1016/j.aquabot.2007.10.001 |
| 文献子类 | Article |
| 英文摘要 | ISSR analysis was used to investigate genetic variations of 184 haploid and diploid samples from nine North Atlantic Chondrus crispus Stackhouse populations and one outgroup Yellow Sea Chondrus ocellatus Holmes population. Twenty-two of 50 primers were selected and 163 loci were scored for genetic diversity analysis. Genetic diversity varied among populations, percentage of polymorphic bands (PPB) ranged from 27.0 to 55.8%, H(Nei's genetic diversity) ranged from 0.11 to 0.20 and I(Shannon's information index) ranged from 0.16 to 0.30. Estimators PPB, H and I had similar values in intra-population genetic diversity, regardless of calculation methods. Analysis of molecular variance (AMOVA) apportioned inter-population and intra-population variations for C crispus, showing more genetic variance (56.5%) occurred in intra-population, and 43.5% variation among nine populations. The Mantel test suggested that genetic differentiation between nine C. crispus populations was closely related with geographic distances (R = 0.78, P = 0.002). Results suggest that, on larger distance scale (ca. > 1000 km), ISSR analysis is useful for determining genetic differentiations of C crispus populations including morphologically inseparable haploid and diploid individuals. (c) 2007 Elsevier B.V. All rights reserved.; ISSR analysis was used to investigate genetic variations of 184 haploid and diploid samples from nine North Atlantic Chondrus crispus Stackhouse populations and one outgroup Yellow Sea Chondrus ocellatus Holmes population. Twenty-two of 50 primers were selected and 163 loci were scored for genetic diversity analysis. Genetic diversity varied among populations, percentage of polymorphic bands (PPB) ranged from 27.0 to 55.8%, H(Nei's genetic diversity) ranged from 0.11 to 0.20 and I(Shannon's information index) ranged from 0.16 to 0.30. Estimators PPB, H and I had similar values in intra-population genetic diversity, regardless of calculation methods. Analysis of molecular variance (AMOVA) apportioned inter-population and intra-population variations for C crispus, showing more genetic variance (56.5%) occurred in intra-population, and 43.5% variation among nine populations. The Mantel test suggested that genetic differentiation between nine C. crispus populations was closely related with geographic distances (R = 0.78, P = 0.002). Results suggest that, on larger distance scale (ca. > 1000 km), ISSR analysis is useful for determining genetic differentiations of C crispus populations including morphologically inseparable haploid and diploid individuals. (c) 2007 Elsevier B.V. All rights reserved. |
| 学科主题 | Plant Sciences ; Marine & Freshwater Biology |
| URL标识 | 查看原文 |
| 语种 | 英语 |
| WOS记录号 | WOS:000253021700010 |
| 公开日期 | 2010-12-24 |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/5667]  |
| 专题 | 海洋研究所_实验海洋生物学重点实验室 |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Qingdao 266071, Peoples R China 2.Ocean Univ China, Div Life Sci & Technol, Qingdao 266003, Peoples R China 3.Acadian Seaplants Ltd, Dartmouth, NS B3B 1X8, Canada |
| 推荐引用方式 GB/T 7714 | Wang, Xiuliang,Zhao, Fengjuan,Hu, Zimin,et al. Inter-simple sequence repeat (ISSR) analysis of genetic variation of Chondrus crispus populations from North Atlantic[J]. AQUATIC BOTANY,2008,88(2):154-159. |
| APA | Wang, Xiuliang,Zhao, Fengjuan,Hu, Zimin,Critchley, Alan T.,Morrell, Steve L.,&Duan, Delin.(2008).Inter-simple sequence repeat (ISSR) analysis of genetic variation of Chondrus crispus populations from North Atlantic.AQUATIC BOTANY,88(2),154-159. |
| MLA | Wang, Xiuliang,et al."Inter-simple sequence repeat (ISSR) analysis of genetic variation of Chondrus crispus populations from North Atlantic".AQUATIC BOTANY 88.2(2008):154-159. |
入库方式： OAI收割
来源：海洋研究所
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