Iprox: an integrated proteome resource
文献类型：期刊论文
| 作者 | Ma, Jie1; Chen, Tao1; Wu, Songfeng1; Yang, Chunyuan1; Bai, Mingze2; Shu, Kunxian2; Li, Kenli3; Zhang, Guoqing4; Jin, Zhong5; He, Fuchu1 |
| 刊名 | Nucleic acids research
 |
| 出版日期 | 2019-01-08 |
| 卷号 | 47期号:D1页码:D1211-d1217 |
| ISSN号 | 0305-1048 |
| DOI | 10.1093/nar/gky869 |
| 通讯作者 | He, fuchu(hefc@nic.bmi.ac.cn) ; Hermjakob, henning(hhe@ebi.ac.uk) ; Zhu, yunping(zhuyunping@gmail.com) |
| 英文摘要 | Sharing of research data in public repositories has become best practice in academia. with the accumulation of massive data, network bandwidth and storage requirements are rapidly increasing. the proteomexchange (px) consortium implements a mode of centralized metadata and distributed raw data management, which promotes effective data sharing. to facilitate open access of proteome data worldwide, we have developed the integrated proteome resource iprox (http://www.iprox.org) as a public platform for collecting and sharing raw data, analysis results and metadata obtained from proteomics experiments. the iprox repository employs a web-based proteome data submission process and open sharing of mass spectrometry-based proteomics datasets. also, it deploys extensive controlled vocabularies and ontologies to annotate proteomics datasets. users can use a gui to provide and access data through a fast aspera-based transfer tool. iprox is a full member of the px consortium; all released datasets are freely accessible to the public. iprox is based on a high availability architecture and has been deployed as part of the proteomics infrastructure of china, ensuring long-term and stable resource support. iprox will facilitate worldwide data analysis and sharing of proteomics experiments. |
| WOS关键词 | DATA SUBMISSION ; PRIDE DATABASE ; DATA STANDARD ; RECOMMENDATIONS ; IDENTIFICATION ; DISCOVERY ; PROTEINS ; TOOLS |
| WOS研究方向 | Biochemistry & Molecular Biology |
| WOS类目 | Biochemistry & Molecular Biology |
| 语种 | 英语 |
| 出版者 | OXFORD UNIV PRESS |
| WOS记录号 | WOS:000462587400164 |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2374258 |
| 专题 | 计算机网络信息中心 |
| 通讯作者 | He, Fuchu; Hermjakob, Henning; Zhu, Yunping |
| 作者单位 | 1.Beijing Inst Life Omics, Natl Ctr Prot Sci Beijing, Beijing Proteome Res Ctr, State Key Lab Prote, Beijing 102206, Peoples R China 2.Chongqing Univ Posts & Telecommun, Chongqing 400065, Peoples R China 3.Hunan Univ, Natl Supercomp Ctr Changsha, Changsha 410082, Hunan, Peoples R China 4.Shanghai Acad Sci & Technol, Shanghai Inst Biomed, Shanghai Ctr Bioinformat Technol, Shanghai 200235, Peoples R China 5.Chinese Acad Sci, Comp Network Informat Ctr, Beijing 100190, Peoples R China 6.EBI, EMBL, Wellcome Genome Campus, Cambridge CB10 1SD, England |
| 推荐引用方式 GB/T 7714 | Ma, Jie,Chen, Tao,Wu, Songfeng,et al. Iprox: an integrated proteome resource[J]. Nucleic acids research,2019,47(D1):D1211-d1217. |
| APA | Ma, Jie.,Chen, Tao.,Wu, Songfeng.,Yang, Chunyuan.,Bai, Mingze.,...&Zhu, Yunping.(2019).Iprox: an integrated proteome resource.Nucleic acids research,47(D1),D1211-d1217. |
| MLA | Ma, Jie,et al."Iprox: an integrated proteome resource".Nucleic acids research 47.D1(2019):D1211-d1217. |
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