Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling
文献类型：期刊论文
| 作者 | Song, Hao1,2; Yu, Zheng-Lin1,2; Sun, Li-Na1; Xue, Dong-Xiu1; Zhang, Tao1; Wang, Hai-Yan1 |
| 刊名 | G3-genes genomes genetics
 |
| 出版日期 | 2016-07-01 |
| 卷号 | 6期号:7页码:2181-2193 |
| 关键词 | Transcriptome Rapana venosa Gastropod Larva Digital gene expression |
| ISSN号 | 2160-1836 |
| DOI | 10.1534/g3.116.029314 |
| 通讯作者 | Zhang, tao(tzhang@qdio.ac.cn) ; Wang, hai-yan(haiyanwang@qdio.ac.cn) |
| 英文摘要 | During the life cycle of shellfish, larval development, especially metamorphosis, has a vital influence on the dynamics, distribution, and recruitment of natural populations, as well as seed breeding. rapana venosa, a carnivorous gastropod, is an important commercial shellfish in china, and is an ecological invader in the united states, argentina, and france. however, information about the mechanism of its early development is still limited, because research in this area has long suffered from a lack of genomic resources. in this study, 15 digital gene expression (dge) libraries from five developmental stages of r. venosa were constructed and sequenced on the iiiumina hi-sequation 2500 platform. bioinformatics-analysis identified numerous differentially and specifically expressed genes, which revealed that genes associated with growth, nervous system, digestive system, immune system, and apoptosis participate in important developmental processes. the functional analysis of differentially expressed genes was further implemented by gene ontology, and kyoto encyclopedia of genes and genomes enrichment. dge profiling provided a general picture of the transcriptomic activities during the early development of r. venosa, which may provide interesting hints for further study. our data represent the first comparative transcriptomic information available for the early development of r. venosa, which is a prerequisite for a better understanding of the physiological traits controlling development. |
| WOS关键词 | OYSTER CRASSOSTREA-GIGAS ; SNAIL ILYANASSA-OBSOLETA ; MOLECULAR CHARACTERIZATION ; HALIOTIS-ASININA ; FEMALE SIZE ; RNA-SEQ ; METAMORPHOSIS ; SEROTONIN ; ABALONE ; VALENCIENNES |
| WOS研究方向 | Genetics & Heredity |
| WOS类目 | Genetics & Heredity |
| 语种 | 英语 |
| WOS记录号 | WOS:000379590200038 |
| 出版者 | GENETICS SOCIETY AMERICA |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2374712 |
| 专题 | 中国科学院大学 |
| 通讯作者 | Zhang, Tao; Wang, Hai-Yan |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, 7 Nanhai Rd, Qingdao 266071, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Song, Hao,Yu, Zheng-Lin,Sun, Li-Na,et al. Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling[J]. G3-genes genomes genetics,2016,6(7):2181-2193. |
| APA | Song, Hao,Yu, Zheng-Lin,Sun, Li-Na,Xue, Dong-Xiu,Zhang, Tao,&Wang, Hai-Yan.(2016).Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling.G3-genes genomes genetics,6(7),2181-2193. |
| MLA | Song, Hao,et al."Transcriptomic analysis of differentially expressed genes during larval development of rapana venosa by digital gene expression profiling".G3-genes genomes genetics 6.7(2016):2181-2193. |
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来源：中国科学院大学
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