De novo transcriptome analysis reveals distinct defense mechanisms by young and mature leaves of hevea brasiliensis (para rubber tree)
文献类型：期刊论文
| 作者 | Fang, Yongjun1; Mei, Hailiang2,3; Zhou, Binhui1; Xiao, Xiaohu1; Yang, Meng2; Huang, Yacheng1; Long, Xiangyu1; Hu, Songnian2; Tang, Chaorong1 |
| 刊名 | Scientific reports
 |
| 出版日期 | 2016-09-13 |
| 卷号 | 6页码:10 |
| ISSN号 | 2045-2322 |
| DOI | 10.1038/srep33151 |
| 通讯作者 | Hu, songnian(husn@big.ac.cn) ; Tang, chaorong(chaorongtang@126.com) |
| 英文摘要 | Along with changes in morphology in the course of maturation, leaves of hevea brasiliensis become more resistant to leaf diseases, including the south american leaf blight (salb), a devastating fungal disease of this economically important tree species. to understand the underlying mechanisms of this defense, and to identify the candidate genes involved, we sequenced the hevea leaf transcriptome at four developmental stages (i to iv) by illumina sequencing. a total of 62.6 million high-quality reads were generated, and assembled into 98,796 unique transcripts. we identified 3,905 differentially expressed genes implicated in leaf development, 67.8% (2,651) of which were during the transition to leaf maturation. the genes involved in cyanogenic metabolism, lignin and anthocyanin biosynthesis were noteworthy for their distinct patterns of expression between developing leaves (stages i to iii) and mature leaves (stage iv), and the correlation with the change in resistance to salb and the oidium/colletotrichum leaf fall. the results provide a first profile of the molecular events that relate to the dynamics of leaf morphology and defense strategies during hevea leaf development. this dataset is beneficial to devising strategies to engineer resistance to leaf diseases as well as other in-depth studies in hevea tree. |
| WOS关键词 | RNA-SEQ DATA ; MANIHOT-ESCULENTA CRANTZ ; AMERICAN LEAF-BLIGHT ; CYANOGENIC GLUCOSIDES ; FUNCTIONAL ANNOTATION ; HYDROXYNITRILE LYASE ; SUCROSE SYNTHASE ; REFERENCE GENOME ; GENE-EXPRESSION ; WEB SERVER |
| WOS研究方向 | Science & Technology - Other Topics |
| WOS类目 | Multidisciplinary Sciences |
| 语种 | 英语 |
| WOS记录号 | WOS:000382932600001 |
| 出版者 | NATURE PUBLISHING GROUP |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2376331 |
| 专题 | 中国科学院大学 |
| 通讯作者 | Hu, Songnian; Tang, Chaorong |
| 作者单位 | 1.Chinese Acad Trop Agr Sci, Rubber Res Inst, Danzhou 571737, Hainan, Peoples R China 2.Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, Beijing 100101, Peoples R China 3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Fang, Yongjun,Mei, Hailiang,Zhou, Binhui,et al. De novo transcriptome analysis reveals distinct defense mechanisms by young and mature leaves of hevea brasiliensis (para rubber tree)[J]. Scientific reports,2016,6:10. |
| APA | Fang, Yongjun.,Mei, Hailiang.,Zhou, Binhui.,Xiao, Xiaohu.,Yang, Meng.,...&Tang, Chaorong.(2016).De novo transcriptome analysis reveals distinct defense mechanisms by young and mature leaves of hevea brasiliensis (para rubber tree).Scientific reports,6,10. |
| MLA | Fang, Yongjun,et al."De novo transcriptome analysis reveals distinct defense mechanisms by young and mature leaves of hevea brasiliensis (para rubber tree)".Scientific reports 6(2016):10. |
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来源：中国科学院大学
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