Silkdb: a knowledgebase for silkworm biology and genomics
文献类型：期刊论文
| 作者 | Wang, J; Xia, QY; He, XM; Dai, MT; Ruan, J; Chen, J; Yu, G; Yuan, HF; Hu, YF; Li, RQ |
| 刊名 | Nucleic acids research
 |
| 出版日期 | 2005 |
| 卷号 | 33页码:D399-d402 |
| ISSN号 | 0305-1048 |
| DOI | 10.1093/nar/gki116 |
| 通讯作者 | Yu, j() |
| 英文摘要 | The silkworm knowledgebase (silkdb) is a web-based repository for the curation, integration and study of silkworm genetic and genomic data. with the recent accomplishment of a similar to6x draft genome sequence of the domestic silkworm (bombyx mori), silkdb provides an integrated representation of the large-scale, genome-wide sequence assembly, cdnas, clusters of expressed sequence tags (ests), transposable elements (tes), mutants, single nucleotide polymorphisms (snps) and functional annotations of genes with assignments to interpro domains and gene ontology (go) terms. silkdb also hosts a set of ests from bombyx mandarina, a wild progenitor of b.mori, and a collection of genes from other lepidoptera. comparative analysis results between the domestic and wild silkworm, between b.mori and other lepidoptera, and between b.mori and the two sequenced insects, fruitfly and mosquito, are displayed by using b.mori genome sequence as a reference framework. designed as a basic platform, silkdb strives to provide a comprehensive knowledgebase about the silkworm and present the silkworm genome and related information in systematic and graphical ways for the convenience of in-depth comparative studies. silkdb is publicly accessible at http://silkworm.genomics.org.cn. |
| WOS关键词 | BOMBYX-MORI ; SEQUENCE ; DATABASE ; DNA ; RESOURCE |
| WOS研究方向 | Biochemistry & Molecular Biology |
| WOS类目 | Biochemistry & Molecular Biology |
| 语种 | 英语 |
| WOS记录号 | WOS:000226524300082 |
| 出版者 | OXFORD UNIV PRESS |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2377418 |
| 专题 | 中国科学院大学 |
| 通讯作者 | Yu, J |
| 作者单位 | 1.Chinese Acad Sci, Beijing Genom Inst, Beijing 101300, Peoples R China 2.Beijing Univ, Coll Life Sci, Beijing 100871, Peoples R China 3.SW Agr Univ, Key Sericultural Lab Agr Minist, Chongqing 400716, Peoples R China 4.Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China 5.Zhejiang Univ, Key Lab Bioinformat Zhejiang Prov, Hangzhou Genom Inst, James D Watson Inst Genome Sci, Hangzhou 310007, Peoples R China 6.Univ Washington, Dept Med, Genome Ctr, Seattle, WA 98195 USA |
| 推荐引用方式 GB/T 7714 | Wang, J,Xia, QY,He, XM,et al. Silkdb: a knowledgebase for silkworm biology and genomics[J]. Nucleic acids research,2005,33:D399-d402. |
| APA | Wang, J.,Xia, QY.,He, XM.,Dai, MT.,Ruan, J.,...&Yu, J.(2005).Silkdb: a knowledgebase for silkworm biology and genomics.Nucleic acids research,33,D399-d402. |
| MLA | Wang, J,et al."Silkdb: a knowledgebase for silkworm biology and genomics".Nucleic acids research 33(2005):D399-d402. |
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来源：中国科学院大学
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