ArMone: A Software Suite Specially Designed for Processing and Analysis of Phosphoproteome Data
文献类型：期刊论文
| 作者 | Jiang, Xinning1,2; Ye, Mingliang1; Cheng, Kai1,2; Zou, Hanfa1 |
| 刊名 | journal of proteome research
 |
| 出版日期 | 2010-05-01 |
| 卷号 | 9期号:5页码:2743-2751 |
| 关键词 | phosphoproteome analysis automatic validation bioinformatics software |
| ISSN号 | 1535-3893 |
| 产权排序 | 1;1 |
| 通讯作者 | 邹汉法 |
| 英文摘要 | the development of new phosphoproteomic technologies has led to a rapid increase in the number of phosphoprotein identifications. managing and extracting valuable information from the phosphoproteome data sets and generating output information in user-friendly formats require special data management and process platform. even though a few proteome pipelines have been developed, they are mainly designed for processing data set of unmodified peptide/protein identifications. because of the different characteristics of phosphorylated peptides/proteins, these pipelines are inconvenient, sometimes inappropriate, to process the phosphoproteome data sets. in this study, a software suite named armone was specially designed for the management and analysis of phosphoproteome data. it can readily identify phosphopeptides with high reliability and high sensitivity, and can effectively pinpoint the most probable phosphorylation site. a few well-designed postvalidation process tools are also available to extract and export valuable information. armone is a stand-alone application with friendly graphic user interface. it can run on different operating systems and can process data sets obtained by most of the commonly used database search engines. |
| WOS标题词 | science & technology ; life sciences & biomedicine |
| 类目[WOS] | biochemical research methods |
| 研究领域[WOS] | biochemistry & molecular biology |
| 关键词[WOS] | tandem mass-spectra ; phosphorylation analysis ; protein-phosphorylation ; peptide identification ; spectrometry ; proteomics ; phosphopeptides ; chromatography ; enrichment |
| 收录类别 | SCI |
| 原文出处 | false |
| 语种 | 英语 |
| WOS记录号 | WOS:000277353200063 |
| 公开日期 | 2010-11-30 |
| 源URL | [http://159.226.238.44/handle/321008/103091]  |
| 专题 | 大连化学物理研究所_中国科学院大连化学物理研究所 |
| 作者单位 | 1.Chinese Acad Sci, Dalian Inst Chem Phys, Natl Chromatog R&A Ctr, CAS Key Lab Separat Sci Analyt Chem, Dalian 116023, Peoples R China 2.Chinese Acad Sci, Grad Sch, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Jiang, Xinning,Ye, Mingliang,Cheng, Kai,et al. ArMone: A Software Suite Specially Designed for Processing and Analysis of Phosphoproteome Data[J]. journal of proteome research,2010,9(5):2743-2751. |
| APA | Jiang, Xinning,Ye, Mingliang,Cheng, Kai,&Zou, Hanfa.(2010).ArMone: A Software Suite Specially Designed for Processing and Analysis of Phosphoproteome Data.journal of proteome research,9(5),2743-2751. |
| MLA | Jiang, Xinning,et al."ArMone: A Software Suite Specially Designed for Processing and Analysis of Phosphoproteome Data".journal of proteome research 9.5(2010):2743-2751. |
入库方式： OAI收割
来源：大连化学物理研究所
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