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The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae)

文献类型：期刊论文

作者Zhao, Kai2,3,4; Tang, Yongtao1,2,3,4; Tong, Chao1,2,3,4
刊名CONSERVATION GENETICS RESOURCES
出版日期2017-09-01
卷号9期号:3页码:443-445
关键词Illumina Sequencing Gymnocypris Przewalskii Kelukehuensis Subspecies Mitogenome
ISSN号1877-7252
DOI10.1007/s12686-017-0707-3
文献子类Article
英文摘要Gymnocypris przewalskii kelukehuensis: (Teleostei: Cyprinidae) is a new subspecies of Gymnocypris przewalskii which endemic to Lake Keluke on the Tibetan Plateau,. However, it is now threatened by exotic species invasions and overfishing, and its natural population has been dramatically decreased. Here we firstly report its complete mitochondrial genome by low-coverage whole genome sequencing method. The total length of mitogenome is 16,682 bp, including 22 transfer RNAs (tRNAs), 13 protein-coding genes (PCGs) and two ribosomal RNAs (rRNAs). The putative control region is located between tRNA-Phe and tRNA-Pro, with an A + T content of 64.11%. The base composition of the genome is A (28.73%), C (25.86%), G (18.04%) and C (27.35%) with an overall GC content of 43.91%. Phylogenetic analysis suggests that G. p. kelukehuensis is closely related to G. przewalskii complex.
WOS研究方向Biodiversity & Conservation ; Genetics & Heredity
语种英语
WOS记录号WOS:000407231600024
出版者SPRINGER
资助机构National Natural Science Foundation of China(31572258 ; Chinese Academy of Sciences(KSCX2-EW-N-004) ; Open Foundation from the Qinghai Key Laboratory of Tibetan Medicine Pharmacology and Safety Evaluation(2014-ZY-03) ; 31500306)
源URL[http://ir.nwipb.ac.cn/handle/363003/9790]  
专题西北高原生物研究所_中国科学院西北高原生物研究所
通讯作者Zhao, Kai
作者单位1.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
2.Chinese Acad Sci, Northwest Inst Plateau Biol, Qinghai Key Lab Anim Ecol Genom, Xining 810001, Qinghai, Peoples R China
3.Chinese Acad Sci, Northwest Inst Plateau Biol, Lab Plateau Fish Evolutionary & Funct Genom, Xining 810001, Qinghai, Peoples R China
4.Chinese Acad Sci, Northwest Inst Plateau Biol, Key Lab Adaptat & Evolut Plateau Biota, Xining 810001, Qinghai, Peoples R China
推荐引用方式
GB/T 7714		 Zhao, Kai,Tang, Yongtao,Tong, Chao. The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae)[J]. CONSERVATION GENETICS RESOURCES,2017,9(3):443-445.
APA Zhao, Kai,Tang, Yongtao,&Tong, Chao.(2017).The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae).CONSERVATION GENETICS RESOURCES,9(3),443-445.
MLA Zhao, Kai,et al."The complete mitochondrial genome of Gymnocypris przewalskii kelukehuensis (Teleostei: Cyprinidae)".CONSERVATION GENETICS RESOURCES 9.3(2017):443-445.

入库方式： OAI收割

来源：西北高原生物研究所

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