Transcriptome profile of polycyclic aromatic hydrocarbon-degrading fungi isolated from Taxus rhizosphere
文献类型：期刊论文
| 作者 | Ge, Guang Bo1,3; Gao, Rui2; Hao, Da Cheng2; Hu, Wenli2; Song, Song2; Li, Shi Yang1 |
| 刊名 | CURRENT SCIENCE
 |
| 出版日期 | 2019-04-10 |
| 卷号 | 116期号:7页码:1218-1228 |
| 关键词 | Biodegradation polycyclic aromatic hydrocarbon Talaromyces verruculosus Taxus mairei transcriptome sequencing |
| ISSN号 | 0011-3891 |
| DOI | 10.18520/cs/v116/i7/1218-1228 |
| 通讯作者 | Hao, Da Cheng(hao@djtu.edu.cn) |
| 英文摘要 | The present study aims to examine polycyclic aromatic hydrocarbon (PAH)-degrading fungal strains isolated from rhizosphere soil of Taxus mairei. Talaromyces verruculosus strain DJTU-SJ5 showed the higher PAH degradation than other strains. Improved degradation of five PAHs was attained using the two-member consortium. The industrial potential of DJTU-SJ5 has been highlighted. The transcriptome profiles of DJTU-SJ5 before and after PAH challenge were decoded by high-throughput RNA sequencing. A total of 33,084 unigenes were obtained by de novo assembly of 19.9 Gb clean sequencing reads; 10,532, 1,104 and 11,779 unigenes were expressed distinctly between control and phenanthrene (phen)-treated samples; control and pyrene (pyre)-treated samples, and phen and pyre respectively. These included numerous PAH degradation, defence and stress-related genes. The degradation pathway of PAHs in strain DJTU-SJ5 is proposed based on the metabolites and transcriptome analyses. |
| WOS关键词 | BIODEGRADATION ; DEGRADATION ; PHENANTHRENE ; COMMUNITY ; IDENTIFICATION ; PATHWAY ; PYRENE ; PAHS |
| 资助项目 | Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project[477668/2012-7] ; Mackenzie Presbyterian University, Sao Paulo, Brazil |
| WOS研究方向 | Science & Technology - Other Topics |
| 语种 | 英语 |
| WOS记录号 | WOS:000463900200033 |
| 出版者 | INDIAN ACAD SCIENCES |
| 资助机构 | Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Mackenzie Presbyterian University, Sao Paulo, Brazil ; Mackenzie Presbyterian University, Sao Paulo, Brazil ; Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Mackenzie Presbyterian University, Sao Paulo, Brazil ; Mackenzie Presbyterian University, Sao Paulo, Brazil ; Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Mackenzie Presbyterian University, Sao Paulo, Brazil ; Mackenzie Presbyterian University, Sao Paulo, Brazil ; Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Conselho Nacional de DesenvolvimentoCientifico e Tecnologico Project ; Mackenzie Presbyterian University, Sao Paulo, Brazil ; Mackenzie Presbyterian University, Sao Paulo, Brazil |
| 源URL | [http://cas-ir.dicp.ac.cn/handle/321008/165660]  |
| 专题 | 大连化学物理研究所_中国科学院大连化学物理研究所 |
| 通讯作者 | Hao, Da Cheng |
| 作者单位 | 1.Chinese Acad Sci, Dalian Inst Chem Phys, Lab Pharmaceut Resource Discovery, Dalian 116023, Peoples R China 2.Dalian Jiaotong Univ, Sch Environm & Chem Engn, Dalian 116028, Peoples R China 3.Shanghai Univ Tradit Chinese Med, Inst Interdisciplinary Med, Shanghai 201203, Peoples R China |
| 推荐引用方式 GB/T 7714 | Ge, Guang Bo,Gao, Rui,Hao, Da Cheng,et al. Transcriptome profile of polycyclic aromatic hydrocarbon-degrading fungi isolated from Taxus rhizosphere[J]. CURRENT SCIENCE,2019,116(7):1218-1228. |
| APA | Ge, Guang Bo,Gao, Rui,Hao, Da Cheng,Hu, Wenli,Song, Song,&Li, Shi Yang.(2019).Transcriptome profile of polycyclic aromatic hydrocarbon-degrading fungi isolated from Taxus rhizosphere.CURRENT SCIENCE,116(7),1218-1228. |
| MLA | Ge, Guang Bo,et al."Transcriptome profile of polycyclic aromatic hydrocarbon-degrading fungi isolated from Taxus rhizosphere".CURRENT SCIENCE 116.7(2019):1218-1228. |
入库方式： OAI收割
来源：大连化学物理研究所
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