中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
Systems-level analysis of risk genes reveals the modular nature of schizophrenia

文献类型:期刊论文

作者Xiong-Jian Luo1,3; Jiewei Liu2,4; Bing Su2,3
刊名Schizophrenia Research
出版日期2018
期号*页码:9
关键词Schizophrenia Protein-protein Interaction Molecular Network Disease Module Spatio-temporal Expression Pattern
DOI10.1016/j.schres.2018.05.015
英文摘要

Schizophrenia (SCZ) is a complex mental disorder with high heritability. Genetic studies (especially recent ge-nome-wide association studies) have identified many risk genes for schizophrenia. However, the physical inter-actions among the proteins encoded byschizophreniariskgenes remain elusiveand itisnotknown whethertheidentifiedriskgenesconvergeoncommonmolecularnetworksorpathways.Herewesystematicallyinvestigatedthe network characteristics of schizophrenia risk genes using the high-confidence protein-protein interactions(PPI) from the human interactome. We found that schizophrenia risk genes encode a densely interconnectedPPI network (P = 4.15 × 10 −31 ). Compared with the background genes, the schizophrenia risk genes in the in-teractome have significantly higher degree (P = 5.39 × 10 −11 ), closeness centrality (P = 7.56 × 10 −11 ),betweeness centrality (P = 1.29 × 10 −11 ), clusteringcoefficient (P = 2.22 × 10 −2 ), and shorter average shortestpath length (P = 7.56 × 10 −11 ). Based on the densely interconnected PPI network, we identified 48 hub genesand 4 modules formed by highly interconnected schizophrenia genes. We showed that the proteins encodedbyschizophrenia hubgenes have significantlymoredirect physicalinteractions. Geneontology(GO)analysisre-vealed that cell adhesion, cell cycle, immune system response, and GABR-receptor complex categories wereenriched in the modules formed by highly interconnected schizophrenia risk genes. Our study reveals thatschizophreniariskgenesencodeadenselyinterconnectedmolecularnetworkanddemonstratesthemodularna-ture of schizophrenia.

语种英语
源URL[http://159.226.149.26:8080/handle/152453/12297]  
专题昆明动物研究所_神经系统疾病
通讯作者Xiong-Jian Luo
作者单位1.Key Laboratory of Animal Models and Human Disease Mechanisms of the Chinese Academy of Sciences and Yunnan Province, Kunming Institute of Zoology, Kunming, Yunnan, China
2.State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, China
3.Center for Excellence in Animal Evolution and Genetics, Chinese Academy of Sciences, Kunming 650223, China
4.Kunming College of Life Science, University of Chinese Academy of Sciences, Kunming, Yunnan, China
推荐引用方式
GB/T 7714
Xiong-Jian Luo,Jiewei Liu,Bing Su. Systems-level analysis of risk genes reveals the modular nature of schizophrenia[J]. Schizophrenia Research,2018(*):9.
APA Xiong-Jian Luo,Jiewei Liu,&Bing Su.(2018).Systems-level analysis of risk genes reveals the modular nature of schizophrenia.Schizophrenia Research(*),9.
MLA Xiong-Jian Luo,et al."Systems-level analysis of risk genes reveals the modular nature of schizophrenia".Schizophrenia Research .*(2018):9.

入库方式: OAI收割

来源:昆明动物研究所

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