The incorporation of biochar into soil has been proposed as a strategy for enhancing soil fertility and crop productivity. However, there is limited information regarding the responses of soil respiration and the C, N and P cycles to the addition of apple branch biochar at different rates to soil with different levels of N. A 108-day incubation experiment was conducted to investigate the effects of the rate of biochar addition (0, 1, 2 and 4% by mass) on soil respiration and nutrients and the activities of enzymes involved in C, N and P cycling under two levels of N. Our results showed that the application of apple branch biochar at rates of 2% and 4% increased the C-mineralization rate, while biochar amendment at 1% decreased the C-mineralization rate, regardless of the N level. The soil organic C and microbial biomass C and P contents increased as the rate of biochar addition was increased to 2%. The biochar had negative effects on β-glucosidase, N-acetyl-β-glucosaminidase and urease activity in N-poor soil but exerted a positive effect on all of these factors in N-rich soil. Alkaline phosphatase activity increased with an increase in the rate of biochar addition, but the available P contents after all biochar addition treatments were lower than those obtained in the treatments without biochar. Biochar application at rates of 2% and 4% reduced the soil nitrate content, particularly in N-rich soil. Thus, apple branch biochar has the potential to sequester C and improve soil fertility, but the responses of soil C mineralization and nutrient cycling depend on the rate of addition and soil N levels.