中国科学院机构知识库网格
Chinese Academy of Sciences Institutional Repositories Grid
Improved matrix pooling

文献类型:期刊论文

作者Xiong, Wenjun1,2; Ding, Juan1,3; He, Yuanzhen4; Li, Qizhai2
刊名STATISTICAL METHODS IN MEDICAL RESEARCH
出版日期2019
卷号28期号:1页码:211-222
关键词Matrix pooling efficiency group testing sensitivity specificity
ISSN号0962-2802
DOI10.1177/0962280217719914
英文摘要Pooled testing is useful to identify positive specimens for large-scale screening. Matrix pooling is one of the commonly used algorithms. In this work, we investigate the properties of matrix pooling and reveal that the efficiency of matrix pooling is related with the magnitude of overlapping among groups. Based on this property, we develop a new design to further improve the efficiency while taking into account of testing error. The efficiency, pooling sensitivity and specificity of this algorithm are explicitly derived and verified through plasmode simulation of detecting acute human immunodeficiency virus among patients who were suspected to have malaria in rural Ugandan. We show that the new design outperforms matrix pooling in efficiency while retain the pooling sensitivity and specificity.
资助项目National Natural Science Foundation of China[11526061] ; National Natural Science Foundation of China[11501134] ; National Natural Science Foundation of China[11371353] ; Guangxi Natural Science Foundation[2015GXNSFBA139016] ; key project of Guangxi Normal University[2014ZD002] ; Program on the High Level Innovation Team and Outstanding Scholars in Universities of Guangxi Province ; Special National Key Research and Development Plan[2016YFD0400206] ; Breakthrough Projects of Strategic Priority Program of the Chinese Academy of Sciences[XDB13040600]
WOS研究方向Health Care Sciences & Services ; Mathematical & Computational Biology ; Medical Informatics ; Mathematics
语种英语
WOS记录号WOS:000454598800014
出版者SAGE PUBLICATIONS LTD
源URL[http://ir.amss.ac.cn/handle/2S8OKBNM/32063]  
专题系统科学研究所
通讯作者Xiong, Wenjun
作者单位1.Guangxi Normal Univ, Sch Math & Stat, Guilin, Peoples R China
2.Chinese Acad Sci, Acad Math & Syst Sci, Beijing, Peoples R China
3.Vanderbilt Univ, Sch Med, Dept Med, Nashville, TN 37212 USA
4.Beijing Normal Univ, Sch Math Sci, Beijing, Peoples R China
推荐引用方式
GB/T 7714
Xiong, Wenjun,Ding, Juan,He, Yuanzhen,et al. Improved matrix pooling[J]. STATISTICAL METHODS IN MEDICAL RESEARCH,2019,28(1):211-222.
APA Xiong, Wenjun,Ding, Juan,He, Yuanzhen,&Li, Qizhai.(2019).Improved matrix pooling.STATISTICAL METHODS IN MEDICAL RESEARCH,28(1),211-222.
MLA Xiong, Wenjun,et al."Improved matrix pooling".STATISTICAL METHODS IN MEDICAL RESEARCH 28.1(2019):211-222.

入库方式: OAI收割

来源:数学与系统科学研究院

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