Configuration-dependent properties of contacts in(alpha/beta)(8) barrel proteins
文献类型：期刊论文
| 作者 | Chen, J; Chen, J; Jiang, ZT; Zhang, LX; Zhao, DL |
| 刊名 | ACTA POLYMERICA SINICA
 |
| 出版日期 | 2004-10-01 |
| 期号 | 5页码:688-692 |
| 关键词 | (Alpha/beta)(8) Barrel Protein Medium- And Long-range Contacts Lro Fauchere-pliska Hydrophobicity Value( Fph) |
| ISSN号 | 1000-3304 |
| 英文摘要 | The residue-residue contacts contribute more function to the protein folding and play an active role in the stability of proteins. We calculate the number of medium- and long-range contacts for 90 (alpha/beta)(8) barrel proteins with considering the distance between the centers of two residues in defining residue-residue contacts. The ability to forming contacts in each (alpha/beta)(8) barrel protein was discussed through calculating the number of long- and medium-ranges contacts for different residues in proteins. The relationship between the average numbers of medium-and longrange contacts with Fauchere-Pliska hydrophobicity value (FPH) for 20 amino acid residues was studied, and it was found that the average number of long-range contacts had a linear relation with the Fauchere-Pliska hydrophobicity value ( FPH) however, it had not valid for medium-range contacts. The dimension of (alpha/beta)(8) barrel proteins has a good relation to the long-range contact of proteins, and the characteristic ratio of mean-square radius of gyration < S(2) > can be expressed as |
| 语种 | 英语 |
| WOS记录号 | WOS:000224710100013 |
| 出版者 | SCIENCE PRESS |
| 源URL | [http://ir.iccas.ac.cn/handle/121111/82491]  |
| 专题 | 中国科学院化学研究所 |
| 通讯作者 | Chen, J; Chen, J |
| 作者单位 | 1.Zhejiang Univ, Dept Phys, Hangzhou 310027, Peoples R China 2.Chinese Acad Sci, Inst Chem, Polymer Phys Lab, Beijing 100080, Peoples R China |
| 推荐引用方式 GB/T 7714 | Chen, J,Chen, J,Jiang, ZT,et al. Configuration-dependent properties of contacts in(alpha/beta)(8) barrel proteins[J]. ACTA POLYMERICA SINICA,2004(5):688-692. |
| APA | Chen, J,Chen, J,Jiang, ZT,Zhang, LX,&Zhao, DL.(2004).Configuration-dependent properties of contacts in(alpha/beta)(8) barrel proteins.ACTA POLYMERICA SINICA(5),688-692. |
| MLA | Chen, J,et al."Configuration-dependent properties of contacts in(alpha/beta)(8) barrel proteins".ACTA POLYMERICA SINICA .5(2004):688-692. |
入库方式： OAI收割
来源：化学研究所
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