Characterization of the complete mitochondrial genome of Plagiorchis maculosus (Digenea, Plagiorchiidae), Representative of a taxonomically complex digenean family
文献类型:期刊论文
作者 | Suleman1; Ma, Jun1; Khan, Mian Sayed2; Tkach, Vasyl V.3; Muhammad, Nehaz1; Zhang, Dong4; Zhu, Xing-Quan1 |
刊名 | PARASITOLOGY INTERNATIONAL |
出版日期 | 2019-08-01 |
卷号 | 71期号:1页码:99-105 |
ISSN号 | 1383-5769 |
关键词 | Plagiorchis maculosus Plagiorchiidae Mitochondrial genome Nuclear ribosomal DNA Phylogeny |
DOI | 10.1016/j.parint.2019.04.001 |
英文摘要 | Despite the highly divergent morphology, pathogenicity and worldwide distribution of digenean parasites belonging to one of the largest families, the Plagiorchiidae, there are no complete mitochondrial (mt) genomes published to date for plagiorchiids. In this study, we obtained nuclear ribosomal DNA (ITS region and 28S rDNA) sequences and the complete mt genome sequences of Plagiorchis maculosus (Rudolphi 1802) Braun, 1902, and assessed its phylogenetic relationship with other xiphidiates, based on the mtDNA sequences. The obtained ITS and 28S rDNA sequences were identical to the corresponding sequences of P. maculosus available in GenBank. The complete mitochondrial genome of P. maculosus (14,124 bp) contained 36 genes (atp8 is absent) and a long non-coding region (NCR) with two sets of repeated sequences of 283 nucleotides each. The phylogenetic tree resulting from Bayesian inference (130 analyses based on concatenated nucleotide sequences of all 36 genes of P. maculosus and other xiphidiates mitochondrial genomes, indicated that P. maculosus (and the Plagiorchiidae) is phylogenetically closest to the Brachycladiidae and Paragonimidae. The present study describes the first mitochondrial genome from the type genus of the family Plagiorchiidae. The overall gene arrangement, nucleotide composition, A + T contents, AT and GC skew and codon usage with relative synonymous codon usage (RSCU) for 12 PCGs are described. Characterization of mitochondrial genomes from additional plagiorchiid taxa is necessary to make further progress in phylogenetic and epidemiological studies of these digeneans as well as accurate diagnostics of these parasites including those parasitic in humans. |
WOS关键词 | PHYLOGENETIC ANALYSIS ; SPECIES-DIVERSITY ; GENE ORGANIZATION ; ELEGANS RUDOLPHI ; TANDEM REPEATS ; SEQUENCE ; PLATYHELMINTHES ; TREMATODA ; ECHINOSTOMA ; EFFICIENT |
资助项目 | National Natural Science Foundation of China[31702225] ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program[17JR7WA031] ; Agricultural Science and Technology Innovation Program (ASTIP)[CAAS-ASTIP-2016-LVRI-03] |
WOS研究方向 | Parasitology |
语种 | 英语 |
出版者 | ELSEVIER IRELAND LTD |
WOS记录号 | WOS:000469890500016 |
资助机构 | National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; National Natural Science Foundation of China ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; International Science and Technology Cooperation Project of Gansu Provincial Key Research and Development Program ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) ; Agricultural Science and Technology Innovation Program (ASTIP) |
源URL | [http://ir.ihb.ac.cn/handle/342005/31242] |
专题 | 水生生物研究所_其他_期刊论文 |
通讯作者 | Ma, Jun; Tkach, Vasyl V. |
作者单位 | 1.Chinese Acad Agr Sci, Lanzhou Vet Res Inst, Key Lab Vet Parasitol Gansu Prov, State Key Lab Vet Etiol Biol, Lanzhou 730046, Gansu, Peoples R China 2.Univ Swabi, Dept Zool, Khyber Pakhtunkhwa, Pakistan 3.Univ North Dakota, Dept Biol, Grand Forks, ND 58202 USA 4.Chinese Acad Sci, Inst Hydrobiol, State Key Lab Freshwater Ecol & Biotechnol, Key Lab Aquaculture Dis Control,Minist Agr, Wuhan 430072, Hubei, Peoples R China |
推荐引用方式 GB/T 7714 | Suleman,Ma, Jun,Khan, Mian Sayed,et al. Characterization of the complete mitochondrial genome of Plagiorchis maculosus (Digenea, Plagiorchiidae), Representative of a taxonomically complex digenean family[J]. PARASITOLOGY INTERNATIONAL,2019,71(1):99-105. |
APA | Suleman.,Ma, Jun.,Khan, Mian Sayed.,Tkach, Vasyl V..,Muhammad, Nehaz.,...&Zhu, Xing-Quan.(2019).Characterization of the complete mitochondrial genome of Plagiorchis maculosus (Digenea, Plagiorchiidae), Representative of a taxonomically complex digenean family.PARASITOLOGY INTERNATIONAL,71(1),99-105. |
MLA | Suleman,et al."Characterization of the complete mitochondrial genome of Plagiorchis maculosus (Digenea, Plagiorchiidae), Representative of a taxonomically complex digenean family".PARASITOLOGY INTERNATIONAL 71.1(2019):99-105. |
入库方式: OAI收割
来源:水生生物研究所
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