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Penaeid shrimp genome provides insights into benthic adaptation and frequent molting
文献类型：期刊论文
| 作者 | Zhang, Xiaojun1,2; Yuan, Jianbo1,2; Sun, Yamin3; Li, Shihao1,2,4; Gao, Yi1,2,4; Yu, Yang1,2,4 ; Liu, Chengzhang1,2,4; Wang, Quanchao1,2,4; Lv, Xinjia1,5; Zhang, Xiaoxi1,5
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| 刊名 | NATURE COMMUNICATIONS
 |
| 出版日期 | 2019-01-21 |
| 卷号 | 10页码:14 |
| ISSN号 | 2041-1723 |
| DOI | 10.1038/s41467-018-08197-4 |
| 通讯作者 | Chu, Ka Hou(kahouchu@cuhk.edu.hk) ; Liu, Bin(liubin1981@nankai.edu.cn) ; Li, Fuhua(fhli@qdio.ac.cn) ; Xiang, Jianhai(jhxiang@qdio.ac.cn) |
| 英文摘要 | Crustacea, the subphylum of Arthropoda which dominates the aquatic environment, is of major importance in ecology and fisheries. Here we report the genome sequence of the Pacific white shrimp Litopenaeus vannamei, covering similar to 1.66 Gb (scaffold N50 605.56 Kb) with 25,596 protein-coding genes and a high proportion of simple sequence repeats (>23.93%). The expansion of genes related to vision and locomotion is probably central to its benthic adaptation. Frequent molting of the shrimp may be explained by an intensified ecdysone signal pathway through gene expansion and positive selection. As an important aquaculture organism, L. vannamei has been subjected to high selection pressure during the past 30 years of breeding, and this has had a considerable impact on its genome. Decoding the L. vannamei genome not only provides an insight into the genetic underpinnings of specific biological processes, but also provides valuable information for enhancing crustacean aquaculture. |
| 资助项目 | State 863 High Technology R&D Project of China[2012AA10A404] ; National Natural Science Foundation of China[31830100] ; National Natural Science Foundation of China[41876167] ; Qingdao National Laboratory for Marine Science and Technology[MS2017NO04] ; Hong Kong Collaborative Research Fund (CRF) project[C4042-14G] ; High Performance Computing Center, Institute of Oceanology, CAS ; RV KEXUE[KEXUE2018G19] |
| WOS研究方向 | Science & Technology - Other Topics |
| 语种 | 英语 |
| WOS记录号 | WOS:000456164800013 |
| 出版者 | NATURE PUBLISHING GROUP |
| 源URL | [http://ir.qdio.ac.cn/handle/337002/160694]  |
| 专题 | 海洋研究所_实验海洋生物学重点实验室 |
| 通讯作者 | Chu, Ka Hou; Liu, Bin; Li, Fuhua; Xiang, Jianhai |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266237, Peoples R China 3.Tianjin Biochip Corp, Tianjin 300457, Peoples R China 4.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao 266071, Peoples R China 5.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 6.Chinese Univ Hong Kong, Sch Life Sci, Shatin, Hong Kong 999077, Peoples R China 7.Chinese Acad Agr Sci, Agr Genom Inst, Shenzhen 518120, Peoples R China 8.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Minist Agr, Key Lab Sustainable Utilizat Marine Fisheries Res, Qingdao 266071, Peoples R China 9.Xiamen Univ, Coll Ocean & Earth Sci, Xiamen 361102, Peoples R China 10.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC V5A 1S6, Canada |
| 推荐引用方式 GB/T 7714 | Zhang, Xiaojun,Yuan, Jianbo,Sun, Yamin,et al. Penaeid shrimp genome provides insights into benthic adaptation and frequent molting[J]. NATURE COMMUNICATIONS,2019,10:14. |
| APA | Zhang, Xiaojun.,Yuan, Jianbo.,Sun, Yamin.,Li, Shihao.,Gao, Yi.,...&Xiang, Jianhai.(2019).Penaeid shrimp genome provides insights into benthic adaptation and frequent molting.NATURE COMMUNICATIONS,10,14. |
| MLA | Zhang, Xiaojun,et al."Penaeid shrimp genome provides insights into benthic adaptation and frequent molting".NATURE COMMUNICATIONS 10(2019):14. |
入库方式： OAI收割
来源：海洋研究所
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