Draft genome sequence of the novel strain Pseudomonas sp 10B238 with potential ability to produce antibiotics from deep-sea sediment
文献类型：期刊论文
| 作者 | Pan, Hua-Qi; Hu, Jiang-Chun |
| 刊名 | MARINE GENOMICS
 |
| 出版日期 | 2015-10-01 |
| 卷号 | 23页码:55-57 |
| 关键词 | Pseudomonas Deep-sea Bacterium Antimicrobial Activity Genome Sequence |
| ISSN号 | 1874-7787 |
| DOI | 10.1016/j.margen.2015.05.003 |
| 英文摘要 | Pseudomonas sp. 10B238 was a putatively novel species of Pseudomonas, isolated from a deep-sea sediment of the South China Sea, which had the genetic potential to produce secondary metabolites related to nonribosomal peptides (NRPs), as well as showed moderate antimicrobial activities. Here we report a high quality draft genome of Pseudomonas sp. 10B238, which comprises 4,933,052 bp with the G + C content of 60.23%. A total of 11 potential secondary metabolite biosynthetic gene clusters were predicted, including a NRP for new peptide siderophore. And many anaerobic respiratory terminal enzymes were found for life in deep-sea environments. Our results may provide insights into biosynthetic pathway for antimicrobial bioactive compounds and be helpful to understand the physiological characteristic of this species. (C) 2015 Elsevier B.V. All rights reserved. |
| WOS研究方向 | Genetics & Heredity ; Marine & Freshwater Biology |
| 语种 | 英语 |
| WOS记录号 | WOS:000362618000013 |
| 出版者 | ELSEVIER SCIENCE BV |
| 源URL | [http://210.72.129.5/handle/321005/122225]  |
| 专题 | 中国科学院沈阳应用生态研究所 |
| 通讯作者 | Pan, Hua-Qi |
| 作者单位 | Chinese Acad Sci, Inst Appl Ecol, Shenyang 110016, Peoples R China |
| 推荐引用方式 GB/T 7714 | Pan, Hua-Qi,Hu, Jiang-Chun. Draft genome sequence of the novel strain Pseudomonas sp 10B238 with potential ability to produce antibiotics from deep-sea sediment[J]. MARINE GENOMICS,2015,23:55-57. |
| APA | Pan, Hua-Qi,&Hu, Jiang-Chun.(2015).Draft genome sequence of the novel strain Pseudomonas sp 10B238 with potential ability to produce antibiotics from deep-sea sediment.MARINE GENOMICS,23,55-57. |
| MLA | Pan, Hua-Qi,et al."Draft genome sequence of the novel strain Pseudomonas sp 10B238 with potential ability to produce antibiotics from deep-sea sediment".MARINE GENOMICS 23(2015):55-57. |
入库方式： OAI收割
来源：沈阳应用生态研究所
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