Different Sets of Post-Embryonic Development Genes Are Conserved or Lost in Two Caryophyllales Species (Reaumuria soongorica and Agriophyllum squarrosum)
文献类型：期刊论文
| 作者 | Zhao, Pengshan1,2; Zhang, Jiwei1,2; Zhao, Xin1,2; Chen, Guoxiong1,2; Ma, Xiao-Fei1,2 |
| 刊名 | PLOS ONE
 |
| 出版日期 | 2016-01-27 |
| 卷号 | 11期号:1页码:14 |
| ISSN号 | 1932-6203 |
| DOI | 10.1371/journal.pone.0148034 |
| 通讯作者 | Zhao, Pengshan(zhaopengshan@lzb.ac.cn) |
| 英文摘要 | Reaumuria soongorica and sand rice (Agriophyllum squarrosum) belong to the clade of Caryophyllales and are widely distributed in the desert regions of north China. Both plants have evolved many specific traits and adaptation strategies to cope with recurring environmental threats. However, the genetic basis that underpins their unique traits and adaptation remains unknown. In this study, the transcriptome data of R. soongorica and sand rice were compared with three other species with previously sequenced genomes (Arabidopsis thaliana, Oryza sativa, and Beta vulgaris). Four different gene sets were identified, namely, the genes conserved in both species, those lost in both species, those conserved in R. soongorica only, and those conserved in sand rice only. Gene ontology showed that post-embryonic development genes (PEDGs) were enriched in all gene sets, and different sets of PEDGs were conserved or lost in both the R. soongorica and sand rice genomes. Expression profiles of Arabidopsis orthologs further provided some clues to the function of the species-specific conserved PEDGs. Such orthologs included LEAFY PETIOLE, which could be a candidate gene involved in the development of branch priority in sand rice. |
| 收录类别 | SCI |
| WOS关键词 | DESICCATION TOLERANCE ; ARABIDOPSIS-THALIANA ; ABSCISIC-ACID ; MOLECULAR EVOLUTION ; LEAFY PETIOLE ; RESPONSES ; STRESS ; DEHYDRATION ; GENOME ; IDENTIFICATION |
| WOS研究方向 | Science & Technology - Other Topics |
| WOS类目 | Multidisciplinary Sciences |
| 语种 | 英语 |
| WOS记录号 | WOS:000369528200068 |
| 出版者 | PUBLIC LIBRARY SCIENCE |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2557106 |
| 专题 | 寒区旱区环境与工程研究所 |
| 通讯作者 | Zhao, Pengshan |
| 作者单位 | 1.Chinese Acad Sci, Cold & Arid Reg Environm & Engn Res Inst, Key Lab Stress Physiol & Ecol Cold & Arid Reg, Lanzhou, Gansu, Peoples R China 2.Chinese Acad Sci, Cold & Arid Reg Environm & Engn Res Inst, Shapotou Desert Res & Expt Stn, Lanzhou, Peoples R China |
| 推荐引用方式 GB/T 7714 | Zhao, Pengshan,Zhang, Jiwei,Zhao, Xin,et al. Different Sets of Post-Embryonic Development Genes Are Conserved or Lost in Two Caryophyllales Species (Reaumuria soongorica and Agriophyllum squarrosum)[J]. PLOS ONE,2016,11(1):14. |
| APA | Zhao, Pengshan,Zhang, Jiwei,Zhao, Xin,Chen, Guoxiong,&Ma, Xiao-Fei.(2016).Different Sets of Post-Embryonic Development Genes Are Conserved or Lost in Two Caryophyllales Species (Reaumuria soongorica and Agriophyllum squarrosum).PLOS ONE,11(1),14. |
| MLA | Zhao, Pengshan,et al."Different Sets of Post-Embryonic Development Genes Are Conserved or Lost in Two Caryophyllales Species (Reaumuria soongorica and Agriophyllum squarrosum)".PLOS ONE 11.1(2016):14. |
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来源：寒区旱区环境与工程研究所
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