The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4
文献类型：期刊论文
| 作者 | Chang, Sijing1,2,3; Zhang, Gaosen3,4; Chen, Ximing3,4; Long, Haozhi4,5; Wang, Yilin5; Chen, Tuo2,3; Liu, Guangxiu3,4 |
| 刊名 | STANDARDS IN GENOMIC SCIENCES
 |
| 出版日期 | 2017-07-27 |
| 卷号 | 12页码:8 |
| 关键词 | Pedobacter Crude oil Degradation Genome |
| ISSN号 | 1944-3277 |
| DOI | 10.1186/s40793-017-0249-z |
| 通讯作者 | Chen, Tuo(chentuo@lzb.ac.cn) |
| 英文摘要 | Pedobacter steynii DX4 was isolated from the soil of Tibetan Plateau and it can use crude oil as sole carbon and energy source at 15 degrees C. The genome of Pedobacter steynii DX4 has been sequenced and served as basis for analysis its metabolic mechanism. It is the first genome of crude oil degrading strain in Pedobacter genus. The 6.58 Mb genome has an average G + C content of 41.31% and encodes 5464 genes. In addition, annotation revealed that Pedobacter steynii DX4 has cold shock proteins, abundant response regulators for cell motility, and enzymes involved in energy conversion and fatty acid metabolism. The genomic characteristics could provide information for further study of oil-degrading microbes for recovery of crude oil polluted environment. |
| 收录类别 | SCI |
| WOS关键词 | SP-NOV. ; MICROBIAL COMMUNITIES ; ALKANE HYDROXYLASE ; BACTERIA ; SOILS ; CLASSIFICATION ; CONTAMINATION ; PSYCHROPHILE ; DIVERSITY ; MECHANISM |
| WOS研究方向 | Genetics & Heredity ; Microbiology |
| WOS类目 | Genetics & Heredity ; Microbiology |
| 语种 | 英语 |
| WOS记录号 | WOS:000406794200001 |
| 出版者 | BIOMED CENTRAL LTD |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2557668 |
| 专题 | 寒区旱区环境与工程研究所 |
| 通讯作者 | Chen, Tuo |
| 作者单位 | 1.Univ Chinese Acad Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China 2.Chinese Acad Sci, Northwest Inst Eco Environm & Resources, State Key Lab Cryospher Sci, Lanzhou 730000, Gansu, Peoples R China 3.Key Lab Extreme Environm Microbial Resources & En, Lanzhou 730000, Gansu, Peoples R China 4.Chinese Acad Sci, Northwest Inst Ecoenvironm & Resources, Key Lab Desert & Desertificat, Lanzhou 730000, Gansu, Peoples R China 5.Jiangxi Agr Univ, Coll Biosci & Bioengn, Nanchang 330045, Jiangxi, Peoples R China |
| 推荐引用方式 GB/T 7714 | Chang, Sijing,Zhang, Gaosen,Chen, Ximing,et al. The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4[J]. STANDARDS IN GENOMIC SCIENCES,2017,12:8. |
| APA | Chang, Sijing.,Zhang, Gaosen.,Chen, Ximing.,Long, Haozhi.,Wang, Yilin.,...&Liu, Guangxiu.(2017).The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4.STANDARDS IN GENOMIC SCIENCES,12,8. |
| MLA | Chang, Sijing,et al."The complete genome sequence of the cold adapted crude-oil degrader: Pedobacter steynii DX4".STANDARDS IN GENOMIC SCIENCES 12(2017):8. |
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来源：寒区旱区环境与工程研究所
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