The complete genomic sequence of a novel cold-adapted bacterium, Planococcus maritimus Y42, isolated from crude oil-contaminated soil
文献类型：期刊论文
| 作者 | Yang, Ruiqi1,2,4; Liu, Guangxiu1,2; Chen, Tuo2,3; Zhang, Wei1,2; Zhang, Gaosen1,2; Chang, Sijing2,3,4 |
| 刊名 | STANDARDS IN GENOMIC SCIENCES
 |
| 出版日期 | 2018-10-10 |
| 卷号 | 13页码:8 |
| 关键词 | Planococcus maritimus Qaidam Basin Crude oil Degradation Genome |
| ISSN号 | 1944-3277 |
| DOI | 10.1186/s40793-018-0328-9 |
| 通讯作者 | Liu, Guangxiu(liugx@lzb.ac.cn) ; Chen, Tuo(chentuo@lzb.ac.cn) |
| 英文摘要 | Planococcus maritimus Y42, isolated from the petroleum-contaminated soil of the Qaidam Basin, can use crude oil as its sole source of carbon and energy at 20 degrees C. The genome of P. maritimus strain Y42 has been sequenced to provide information on its properties. Genomic analysis shows that the genome of strain Y42 contains one circular DNA chromosome with a size of 3,718,896 bp and a GC content of 48.8%, and three plasmids (329,482; 89,073; and 12,282 bp). Although the strain Y42 did not show a remarkably higher ability in degrading crude oil than other oil-degrading bacteria, the existence of strain Y42 played a significant role to reducing the overall environmental impact as an indigenous oil-degrading bacterium. In addition, genome annotation revealed that strain Y42 has many genes responsible for hydrocarbon degradation. Structural features of the genomes might provide a competitive edge for P. maritimus strain Y42 to survive in oil-polluted environments and be worthy of further study in oil degradation for the recovery of crude oil-polluted environments. |
| 收录类别 | SCI |
| WOS关键词 | DEGRADING BACTERIA ; PERSIAN-GULF ; BIODEGRADATION ; BIOSURFACTANT ; DEGRADATION ; STRAIN ; BIOREMEDIATION ; CONSORTIUM ; SEDIMENT ; DATABASE |
| WOS研究方向 | Genetics & Heredity ; Microbiology |
| WOS类目 | Genetics & Heredity ; Microbiology |
| 语种 | 英语 |
| WOS记录号 | WOS:000447108400002 |
| 出版者 | BMC |
| URI标识 | http://www.irgrid.ac.cn/handle/1471x/2558293 |
| 专题 | 寒区旱区环境与工程研究所 |
| 通讯作者 | Liu, Guangxiu; Chen, Tuo |
| 作者单位 | 1.Chinese Acad Sci, Northwest Inst Ecoenvironm & Resources, Key Lab Desert & Desertificat, Lanzhou 730000, Peoples R China 2.Key Lab Extreme Environm Microbial Resources & En, Lanzhou 730000, Gansu, Peoples R China 3.Chinese Acad Sci, Northwest Inst Ecoenvironm & Resources, State Key Lab Cryospher Sci, Lanzhou 730000, Peoples R China 4.Univ Chinese Acad Sci, 19A Yuquan Rd, Beijing 100049, Peoples R China |
| 推荐引用方式 GB/T 7714 | Yang, Ruiqi,Liu, Guangxiu,Chen, Tuo,et al. The complete genomic sequence of a novel cold-adapted bacterium, Planococcus maritimus Y42, isolated from crude oil-contaminated soil[J]. STANDARDS IN GENOMIC SCIENCES,2018,13:8. |
| APA | Yang, Ruiqi,Liu, Guangxiu,Chen, Tuo,Zhang, Wei,Zhang, Gaosen,&Chang, Sijing.(2018).The complete genomic sequence of a novel cold-adapted bacterium, Planococcus maritimus Y42, isolated from crude oil-contaminated soil.STANDARDS IN GENOMIC SCIENCES,13,8. |
| MLA | Yang, Ruiqi,et al."The complete genomic sequence of a novel cold-adapted bacterium, Planococcus maritimus Y42, isolated from crude oil-contaminated soil".STANDARDS IN GENOMIC SCIENCES 13(2018):8. |
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来源：寒区旱区环境与工程研究所
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