The bacterial diversity in surface sediment from the South China Sea
文献类型：期刊论文
| 作者 | Lixiang@scsio.ac.cn; Sun, HM; Wang, GH; Dong, JD; Li, XA |
| 刊名 | ACTA OCEANOLOGICA SINICA
 |
| 出版日期 | 2010 |
| 卷号 | 29期号:4页码:98-105 |
| 关键词 | Bacterial Diversity Dgge Marine Sediment South China Sea |
| ISSN号 | 0253-505X |
| 英文摘要 | 16S rDNA sequencing results from this study and literatures demonstrate that sediment bacteria in the South China Sea (SCS) were very diverse, which contained 22 of the 24 phyla of bacteria investigated from marine sediment, however, it was very imbalance among stations. So bacterial diversity from 15 samples which covered a wide range of sediment types from 20 to 3 888 m in depth was studied in DGGE (denature gradient gel electrophoresis) in this paper. The DGGE results indicate that both sediment bacterial diversity and diversity difference among stations were significant. Thirty representative and differential fingerprints among samples were recovered and sequenced, phylogenetic analysis indicates that they may belong to Proteobacteria (alpha-, beta-, gamma-, delta-, epsilon-), Planctomycetes, Firmicutes, Chloroflexi, Acidobacteria, Actinobacteria, Nitrospirae, Gemmatimonadetes, candidate division WS3 and so on, of which, Gemmatimonadetes and candidate division WS3 bacteria were first detected in SCS sediment. This study also shows that bacterial diversity analysis based on DGGE was more potential than traditional 16S rDNA clone library in multiple sample analysis. |
| 学科主题 | Oceanography |
| URL标识 | 查看原文 |
| 资助项目 | LMB |
| WOS记录号 | WOS:000282285900011 |
| 公开日期 | 2011-07-02 |
| 源URL | [http://ir.scsio.ac.cn/handle/344004/3766]  |
| 专题 | 南海海洋研究所_中科院海洋生物资源可持续利用重点实验室 |
| 通讯作者 | Lixiang@scsio.ac.cn |
| 推荐引用方式 GB/T 7714 | Lixiang@scsio.ac.cn,Sun, HM,Wang, GH,et al. The bacterial diversity in surface sediment from the South China Sea[J]. ACTA OCEANOLOGICA SINICA,2010,29(4):98-105. |
| APA | Lixiang@scsio.ac.cn,Sun, HM,Wang, GH,Dong, JD,&Li, XA.(2010).The bacterial diversity in surface sediment from the South China Sea.ACTA OCEANOLOGICA SINICA,29(4),98-105. |
| MLA | Lixiang@scsio.ac.cn,et al."The bacterial diversity in surface sediment from the South China Sea".ACTA OCEANOLOGICA SINICA 29.4(2010):98-105. |
入库方式： OAI收割
来源：南海海洋研究所
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