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Hofmeister series and ionic effects of alkali metal ions on DNA conformation transition in normal and less polarised water solvent

文献类型:期刊论文

作者Wen, Jing1,2; Shen, Xin1,2; Shen, Hao1,2; Zhang, Feng-Shou1,2,3
刊名MOLECULAR PHYSICS
出版日期2014-10-18
卷号112页码:2707-2719
关键词Dna Hofmeister Effect Less Polarised Solvent Ionic Effects Molecular Liquids
ISSN号0026-8976
DOI10.1080/00268976.2014.906674
文献子类Article
英文摘要Normal and less polarised water models are used as the solvent to investigate Hofmeister effects and alkali metal ionic effects on dodecamer d(CGCGAATTCGCG) B-DNA with atomic dynamics simulations. As normal water solvent is replaced by less polarised water, the Hofmeister series of alkali metal ions is changed from Li+ > Na+ similar or equal to K+ similar or equal to Cs+ similar or equal to Rb+ to Li+ > Na+ > K+ > Rb+ > Cs+. In less polarised water, DNA experiences the B -> A conformational transition for the lighter alkali metal counterions (Li+, Na+ and K+). However, it keeps B form for the heavier ions (Rb+ and Cs+). We find that the underlying cause of the conformation transition for these alkali metal ions except K+ is the competition between water molecules and counterions coupling to the free oxygen atoms of the phosphate groups. For K+ ions, the 'economics' of phosphate hydration and 'spine of hydration' are both concerned with the DNA helixes changing.
WOS关键词BROWNIAN DYNAMICS SIMULATIONS ; B-A TRANSITION ; MOLECULAR-DYNAMICS ; NUCLEIC-ACIDS ; CATION INTERACTIONS ; COUNTERION BINDING ; PROTEIN STABILITY ; ATOMIC-RESOLUTION ; DOUBLE HELICES ; SALT-SOLUTIONS
资助项目European Commission[269131]
WOS研究方向Chemistry ; Physics
语种英语
WOS记录号WOS:000348936900009
出版者TAYLOR & FRANCIS LTD
源URL[http://119.78.100.186/handle/113462/49225]  
专题中国科学院近代物理研究所
通讯作者Zhang, Feng-Shou
作者单位1.Beijing Normal Univ, Coll Nucl Sci & Technol, Key Lab Beam Technol & Mat Modificat, Minist Educ, Beijing 100875, Peoples R China
2.Beijing Radiat Ctr, Beijing, Peoples R China
3.Ctr Theoret Nucl Phys, Natl Lab Heavy Ion Accelerator Lanzhou, Lanzhou, Peoples R China
推荐引用方式
GB/T 7714
Wen, Jing,Shen, Xin,Shen, Hao,et al. Hofmeister series and ionic effects of alkali metal ions on DNA conformation transition in normal and less polarised water solvent[J]. MOLECULAR PHYSICS,2014,112:2707-2719.
APA Wen, Jing,Shen, Xin,Shen, Hao,&Zhang, Feng-Shou.(2014).Hofmeister series and ionic effects of alkali metal ions on DNA conformation transition in normal and less polarised water solvent.MOLECULAR PHYSICS,112,2707-2719.
MLA Wen, Jing,et al."Hofmeister series and ionic effects of alkali metal ions on DNA conformation transition in normal and less polarised water solvent".MOLECULAR PHYSICS 112(2014):2707-2719.

入库方式: OAI收割

来源:近代物理研究所

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