Accelerating Spatial Clustering Detection of Epidemic Disease with Graphics Processing Unit
文献类型：会议论文
| 作者 | Zhao,Sisi(赵斯思) ; Zhou,Chenghu |
| 出版日期 | 2010 |
| 会议名称 | 2010 18th International Conference on Geoinformatics, Geoinformatics 2010 |
| 会议日期 | June 18, 2010 - June 20, 2010 |
| 会议地点 | Beijing, China |
| 关键词 | Cluster analysis Computer graphics equipment Computer simulation Cosmic ray detectors Epidemiology Health hazards Program processors Statistical tests |
| 通讯作者 | Zhao,Sisi(赵斯思) |
| 英文摘要 | The statistics of disease clustering is of interest to epidemiologists. In order to detect spatial clustering of disease in all the regions of China, we adopted a likelihood ratio based method which utilizes Monte Carlo simulation and spatial exploring to analyze the real time updating data stored in database. However, large number of random tests for Monte Carlo simulation and large scale of the data set had made the speed of analysis too slow to detect and monitor potential public health hazards. Therefore, we explored to adopt graphics processing unit (GPU) and compute unified device architecture (CUDA) to accelerate the spatial exploring and analyzing process. The algorithm has been implemented efficiently on GPU and the access pattern to memory has been optimized to exploit the computing power of GPU. As a result, the GPU based spatial exploring and likelihood ratio test program performed more than forty times faster then the CPU implementation. The Monte Carlo simulation on GPU performed around thirty times faster than the counter part on CPU. By using GPU and CUDA, the usage of our application is changed from verification after the event to early warning. |
| 收录类别 | EI |
| 会议主办者 | IEEE GRSS; The Geographical Society of China |
| 会议录 | 2010 18th International Conference on Geoinformatics, Geoinformatics 2010
 |
| 会议录出版者 | IEEE Computer Society |
| 会议录出版地 | 445 Hoes Lane - P.O.Box 1331, Piscataway, NJ 08855-1331, United States |
| 语种 | 英语 |
| ISBN号 | 9781424473021 |
| 源URL | [http://ir.igsnrr.ac.cn/handle/311030/21969]  |
| 专题 | 地理科学与资源研究所_研究生部 |
| 推荐引用方式 GB/T 7714 | Zhao,Sisi,Zhou,Chenghu. Accelerating Spatial Clustering Detection of Epidemic Disease with Graphics Processing Unit[C]. 见:2010 18th International Conference on Geoinformatics, Geoinformatics 2010. Beijing, China. June 18, 2010 - June 20, 2010. |
入库方式： OAI收割
来源：地理科学与资源研究所
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