Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
文献类型：期刊论文
| 作者 | Chang, Suhua; Zhang, Jiajie; Liao, Xiaoyun; Zhu, Xinxing; Wang, Dahai; Zhu, Jiang; Feng, Tao; Zhu, Baoli; Gao, George F.; Wang, Jian |
| 刊名 | NUCLEIC ACIDS RESEARCH
 |
| 出版日期 | 2007 |
| 卷号 | 35页码:D376-D380 |
| ISSN号 | 0305-1048 |
| DOI | 10.1093/nar/gkl779 |
| 英文摘要 | Frequent outbreaks of highly pathogenic avian influenza and the increasing data available for comparative analysis require a central database specialized in influenza viruses (IVs). We have established the Influenza Virus Database (IVDB) to integrate information and create an analysis platform for genetic, genomic, and phylogenetic studies of the virus. IVDB hosts complete genome sequences of influenza A virus generated by Beijing Institute of Genomics (BIG) and curates all other published IV sequences after expert annotation. Our Q-Filter system classifies and ranks all nucleotide sequences into seven categories according to sequence content and integrity. IVDB provides a series of tools and viewers for comparative analysis of the viral genomes, genes, genetic polymorphisms and phylogenetic relationships. A search system has been developed for users to retrieve a combination of different data types by setting search options. To facilitate analysis of global viral transmission and evolution, the IV Sequence Distribution Tool (IVDT) has been developed to display the worldwide geographic distribution of chosen viral genotypes and to couple genomic data with epidemiological data. The BLAST, multiple sequence alignment and phylogenetic analysis tools were integrated for online data analysis. Furthermore, IVDB offers instant access to pre-computed alignments and polymorphisms of IV genes and proteins, and presents the results as SNP distribution plots and minor allele distributions. IVDB is publicly available at http://influenza.genomics.org.cn. |
| WOS研究方向 | Biochemistry & Molecular Biology |
| 语种 | 英语 |
| WOS记录号 | WOS:000243494600078 |
| 出版者 | OXFORD UNIV PRESS |
| 源URL | [http://119.78.100.204/handle/2XEOYT63/10915]  |
| 专题 | 中国科学院计算技术研究所期刊论文_英文 |
| 通讯作者 | Yu, Jun |
| 作者单位 | 1.Chinese Acad Sci, Beijing Inst Genom, Beijing 101300, Peoples R China 2.Chinese Acad Sci, Inst Comp Technol, Beijing 100080, Peoples R China 3.Zhejiang Univ, James D Watson Inst Genome Sci, Hangzhou 310007, Peoples R China 4.Chinese Acad Sci, Joint Ctr Microbial Genom, Beijing 101300, Peoples R China 5.Chinese Acad Sci, Inst Microbiol, Ctr Mol Virol, Beijing 100080, Peoples R China |
| 推荐引用方式 GB/T 7714 | Chang, Suhua,Zhang, Jiajie,Liao, Xiaoyun,et al. Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research[J]. NUCLEIC ACIDS RESEARCH,2007,35:D376-D380. |
| APA | Chang, Suhua.,Zhang, Jiajie.,Liao, Xiaoyun.,Zhu, Xinxing.,Wang, Dahai.,...&Wang, Jing.(2007).Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research.NUCLEIC ACIDS RESEARCH,35,D376-D380. |
| MLA | Chang, Suhua,et al."Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research".NUCLEIC ACIDS RESEARCH 35(2007):D376-D380. |
入库方式： OAI收割
来源：计算技术研究所
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