Periodic correlation structures in bacterial and archaeal complete genomes
文献类型：期刊论文
| 作者 | Wu ZB (武作兵); Wu ZB(武作兵)
|
| 刊名 | CURRENT BIOINFORMATICS
 |
| 出版日期 | 2013-04 |
| 卷号 | 8期号:2页码:267-274 |
| 通讯作者邮箱 | wuzb@lnm.imech.ac.cn |
| 关键词 | Bacterial and archaeal complete genomes periodic correlation structures metric representation recurrence plots synecho genome Mycobacterium tuberculosis symbolic dynamics organisms nucleotide strings |
| ISSN号 | 1574-8936 |
| 产权排序 | [Wu, Zuobing] Chinese Acad Sci, Inst Mech, State Key Lab Nonlinear Mech, Beijing 100190, Peoples R China |
| 通讯作者 | Wu, ZB (reprint author), Chinese Acad Sci, Inst Mech, State Key Lab Nonlinear Mech, Beijing 100190, Peoples R China |
| 中文摘要 | The periodic transference of nucleotide strings in bacterial and archaeal complete genomes is investigated by using the metric representation and the recurrence plot method. The generated periodic correlation structures exhibit four kinds of fundamental transferring characteristics: a single increasing period, several increasing periods, an increasing quasi-period and almost noincreasing period. The mechanism of the periodic transference is further analyzed by determining all long periodic nucleotide strings in the bacterial and archaeal complete genomes and is explained as follows: both the repetition of basic periodic nucleotide strings and the transference of non-periodic nucleotide strings would form the periodic correlation structures with approximately the same increasing periods. |
| 学科主题 | 生物力学 |
| 分类号 | 一类 |
| 收录类别 | SCI |
| 资助信息 | National Science Foundation [11172310] |
| 原文出处 | http://dx.doi.org/10.2174/1574893611308020015 |
| 语种 | 英语 |
| WOS记录号 | WOS:000320466700015 |
| 公开日期 | 2013-02-28 |
| 源URL | [http://dspace.imech.ac.cn/handle/311007/46895]  |
| 专题 | 力学研究所_非线性力学国家重点实验室 |
| 通讯作者 | Wu ZB(武作兵) |
| 推荐引用方式 GB/T 7714 | Wu ZB ,Wu ZB. Periodic correlation structures in bacterial and archaeal complete genomes[J]. CURRENT BIOINFORMATICS,2013,8(2):267-274. |
| APA | Wu ZB ,&Wu ZB.(2013).Periodic correlation structures in bacterial and archaeal complete genomes.CURRENT BIOINFORMATICS,8(2),267-274. |
| MLA | Wu ZB ,et al."Periodic correlation structures in bacterial and archaeal complete genomes".CURRENT BIOINFORMATICS 8.2(2013):267-274. |
入库方式： OAI收割
来源：力学研究所
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