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Microbial diversity in the rumen, reticulum, omasum, and abomasum of yak on a rapid fattening regime in an agro-pastoral transition zone

文献类型：期刊论文

作者Xue, Dan1,2; Chen, Huai1,2; Luo, Xiaolin; Guan3; Jiuqiang3; He, Yixin1,2; Zhao, Xinquan1,4
刊名JOURNAL OF MICROBIOLOGY
出版日期2018-10
卷号56期号:10页码:734-743
关键词anaerobic microbiome diversity qPCR MiSeq sequencing Qinghai-Tibetan Plateau
ISSN号1225-8873
DOI10.1007/s12275-018-8133-0
产权排序1
文献子类Article
英文摘要The ruminant digestive system harbors a complex gut microbiome, which is poorly understood in the case of the four stomach compartments of yak. High-throughput sequencing and quantitative PCR were used to analyse microbial communities in the rumen, reticulum, omasum, and abomasum of six domesticated yak. The diversity of prokaryotes was higher in reticulum and omasum than in rumen and abomasum. Bacteroidetes predominated in the four stomach compartments, with abundance gradually decreasing in the trend rumen > reticulum > omasum > abomasum. Microorganism composition was different among the four compartments, all of which contained high levels of bacteria, methanogens, protozoa and anaerobic fungi. Some prokaryotic genera were associated with volatile fatty acids and pH. This study provides the first insights into the microorganism composition of four stomach compartments in yak, and may provide a foundation for future studies in this area.
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WOS关键词REAL-TIME PCR ; QINGHAI-TIBETAN PLATEAU ; RUMINAL ACIDOSIS ; ANAEROBIC FUNGI ; SEQUENCING DATA ; CELL-WALLS ; COMMUNITIES ; POPULATIONS ; BACTERIA ; DEGRADATION
WOS研究方向Microbiology
语种英语
WOS记录号WOS:000446020000006
出版者MICROBIOLOGICAL SOCIETY KOREA
源URL[http://210.75.237.14/handle/351003/29759]  
专题生物多样性与生态系统服务领域_生态研究
成都生物研究所_生态研究
生物多样性与生态系统服务领域_中国科学院山地生态恢复与生物资源利用重点实验室
生物多样性与生态系统服务领域_生态系统恢复与生物多样性保育四川省重点实验室
食品安全与环境治理领域_环境微生物四川省重点实验室
生物多样性与生态系统服务领域
作者单位1.Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration, Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences, Chengdu 610041, P. R. China;
2.Zoige Peatland and Global Change Research Station, Chinese Academy of Sciences, Hongyuan 624400, P. R. China;
3.Sichuan Academy of Grassland Sciences, Chengdu 611731, P. R. China;
4.Northwest Plateau Institute of Biology, Chinese Academy of Sciences,Xining 810008, P. R. China
推荐引用方式
GB/T 7714		 Xue, Dan,Chen, Huai,Luo, Xiaolin,et al. Microbial diversity in the rumen, reticulum, omasum, and abomasum of yak on a rapid fattening regime in an agro-pastoral transition zone[J]. JOURNAL OF MICROBIOLOGY,2018,56(10):734-743.
APA Xue, Dan.,Chen, Huai.,Luo, Xiaolin.,Guan.,Jiuqiang.,...&Zhao, Xinquan.(2018).Microbial diversity in the rumen, reticulum, omasum, and abomasum of yak on a rapid fattening regime in an agro-pastoral transition zone.JOURNAL OF MICROBIOLOGY,56(10),734-743.
MLA Xue, Dan,et al."Microbial diversity in the rumen, reticulum, omasum, and abomasum of yak on a rapid fattening regime in an agro-pastoral transition zone".JOURNAL OF MICROBIOLOGY 56.10(2018):734-743.

入库方式： OAI收割

来源：成都生物研究所

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